Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PDS5AQ29RF7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PDS5AQ29RF7 AC079630.1-202ENST00000618127 1840 ntBASIC27.01■■□□□ 1.91
PDS5AQ29RF7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PDS5AQ29RF7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27■■□□□ 1.91
PDS5AQ29RF7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PDS5AQ29RF7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27■■□□□ 1.91
PDS5AQ29RF7 IGHV3-19-201ENST00000521488 291 ntBASIC27■■□□□ 1.91
PDS5AQ29RF7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27■■□□□ 1.91
PDS5AQ29RF7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27■■□□□ 1.91
PDS5AQ29RF7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PDS5AQ29RF7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
PDS5AQ29RF7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AC126544.1-201ENST00000580842 1059 ntBASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 MIR6821-201ENST00000617625 74 ntBASIC26.99■■□□□ 1.91
PDS5AQ29RF7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDS5AQ29RF7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.98■■□□□ 1.91
PDS5AQ29RF7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDS5AQ29RF7 AC097381.1-201ENST00000429019 1296 ntBASIC26.97■■□□□ 1.91
PDS5AQ29RF7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
PDS5AQ29RF7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDS5AQ29RF7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
PDS5AQ29RF7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDS5AQ29RF7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
PDS5AQ29RF7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.96■■□□□ 1.91
PDS5AQ29RF7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.96■■□□□ 1.91
PDS5AQ29RF7 AC010525.1-201ENST00000585559 441 ntBASIC26.96■■□□□ 1.91
PDS5AQ29RF7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.96■■□□□ 1.91
PDS5AQ29RF7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
PDS5AQ29RF7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PDS5AQ29RF7 TSPY26P-201ENST00000476365 1326 ntBASIC26.95■■□□□ 1.9
PDS5AQ29RF7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PDS5AQ29RF7 ABCB10P4-201ENST00000566803 2184 ntBASIC26.94■■□□□ 1.9
PDS5AQ29RF7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 AP005435.1-201ENST00000529293 1178 ntBASIC26.93■■□□□ 1.9
PDS5AQ29RF7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PDS5AQ29RF7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 MIR5787-201ENST00000611784 55 ntBASIC26.92■■□□□ 1.9
PDS5AQ29RF7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.92■■□□□ 1.9
PDS5AQ29RF7 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PDS5AQ29RF7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 MIR572-201ENST00000384983 95 ntBASIC26.9■■□□□ 1.9
PDS5AQ29RF7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms