Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1BQ00975 AC007322.1-201ENST00000426983 750 ntBASIC20.99■□□□□ 0.95
CACNA1BQ00975 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1BQ00975 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1BQ00975 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1BQ00975 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1BQ00975 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CACNA1BQ00975 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.98■□□□□ 0.95
CACNA1BQ00975 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.98■□□□□ 0.95
CACNA1BQ00975 REXO1L12P-201ENST00000622156 912 ntBASIC20.98■□□□□ 0.95
CACNA1BQ00975 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.98■□□□□ 0.95
CACNA1BQ00975 MIR4497-201ENST00000583208 89 ntBASIC20.98■□□□□ 0.95
CACNA1BQ00975 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA1BQ00975 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CACNA1BQ00975 AC006058.3-201ENST00000606217 1069 ntBASIC20.97■□□□□ 0.95
CACNA1BQ00975 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.97■□□□□ 0.95
CACNA1BQ00975 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CACNA1BQ00975 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1BQ00975 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA1BQ00975 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA1BQ00975 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1BQ00975 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CACNA1BQ00975 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA1BQ00975 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CACNA1BQ00975 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.96■□□□□ 0.95
CACNA1BQ00975 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 AC128676.1-201ENST00000454392 318 ntBASIC20.95■□□□□ 0.94
CACNA1BQ00975 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1BQ00975 RARRES2P4-201ENST00000514074 484 ntBASIC20.95■□□□□ 0.94
CACNA1BQ00975 AC231657.2-201ENST00000624556 255 ntBASIC20.95■□□□□ 0.94
CACNA1BQ00975 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1BQ00975 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1BQ00975 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1BQ00975 MIR718-201ENST00000390190 70 ntBASIC20.94■□□□□ 0.94
CACNA1BQ00975 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.94■□□□□ 0.94
CACNA1BQ00975 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA1BQ00975 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1BQ00975 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1BQ00975 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA1BQ00975 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.94■□□□□ 0.94
CACNA1BQ00975 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
CACNA1BQ00975 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1BQ00975 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA1BQ00975 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1BQ00975 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1BQ00975 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA1BQ00975 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1BQ00975 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA1BQ00975 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CACNA1BQ00975 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CACNA1BQ00975 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1BQ00975 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1BQ00975 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1BQ00975 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA1BQ00975 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1BQ00975 FP325331.1-202ENST00000623531 1380 ntBASIC20.91■□□□□ 0.94
CACNA1BQ00975 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CACNA1BQ00975 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1BQ00975 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1BQ00975 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1BQ00975 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNA1BQ00975 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1BQ00975 AC142472.1-201ENST00000612013 1741 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms