Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMIM11AP58511 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.54■□□□□ 0.88
SMIM11AP58511 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMIM11AP58511 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 AL353803.4-201ENST00000565882 1934 ntBASIC20.53■□□□□ 0.88
SMIM11AP58511 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM11AP58511 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM11AP58511 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM11AP58511 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM11AP58511 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM11AP58511 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM11AP58511 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM11AP58511 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM11AP58511 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.52■□□□□ 0.88
SMIM11AP58511 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM11AP58511 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM11AP58511 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM11AP58511 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM11AP58511 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SMIM11AP58511 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM11AP58511 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM11AP58511 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM11AP58511 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMIM11AP58511 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM11AP58511 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMIM11AP58511 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.5■□□□□ 0.87
SMIM11AP58511 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SMIM11AP58511 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM11AP58511 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.5■□□□□ 0.87
SMIM11AP58511 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM11AP58511 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.5■□□□□ 0.87
SMIM11AP58511 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SMIM11AP58511 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM11AP58511 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.5■□□□□ 0.87
SMIM11AP58511 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM11AP58511 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMIM11AP58511 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM11AP58511 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SMIM11AP58511 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.49■□□□□ 0.87
SMIM11AP58511 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 NTF6A-201ENST00000591175 560 ntBASIC20.49■□□□□ 0.87
SMIM11AP58511 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM11AP58511 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.49■□□□□ 0.87
SMIM11AP58511 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM11AP58511 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMIM11AP58511 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMIM11AP58511 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SMIM11AP58511 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 ABHD17AP5-201ENST00000580133 923 ntBASIC20.48■□□□□ 0.87
SMIM11AP58511 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SMIM11AP58511 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMIM11AP58511 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMIM11AP58511 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.48■□□□□ 0.87
SMIM11AP58511 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMIM11AP58511 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SMIM11AP58511 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM11AP58511 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMIM11AP58511 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SMIM11AP58511 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMIM11AP58511 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.47■□□□□ 0.87
SMIM11AP58511 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms