Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.89■□□□□ 0.77
CLRN1P58418 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLRN1P58418 AL353803.4-201ENST00000565882 1934 ntBASIC19.89■□□□□ 0.77
CLRN1P58418 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.89■□□□□ 0.77
CLRN1P58418 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLRN1P58418 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.88■□□□□ 0.77
CLRN1P58418 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLRN1P58418 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLRN1P58418 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLRN1P58418 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 GUSBP5-201ENST00000418136 578 ntBASIC19.88■□□□□ 0.77
CLRN1P58418 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.88■□□□□ 0.77
CLRN1P58418 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLRN1P58418 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.88■□□□□ 0.77
CLRN1P58418 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLRN1P58418 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
CLRN1P58418 AC133561.1-201ENST00000568600 2415 ntBASIC19.87■□□□□ 0.77
CLRN1P58418 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CLRN1P58418 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLRN1P58418 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 AC012676.1-201ENST00000574705 1949 ntBASIC19.87■□□□□ 0.77
CLRN1P58418 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.87■□□□□ 0.77
CLRN1P58418 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLRN1P58418 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLRN1P58418 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLRN1P58418 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.86■□□□□ 0.77
CLRN1P58418 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.86■□□□□ 0.77
CLRN1P58418 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.86■□□□□ 0.77
CLRN1P58418 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.86■□□□□ 0.77
CLRN1P58418 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLRN1P58418 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.86■□□□□ 0.77
CLRN1P58418 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLRN1P58418 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.85■□□□□ 0.77
CLRN1P58418 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
CLRN1P58418 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLRN1P58418 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.85■□□□□ 0.77
CLRN1P58418 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.85■□□□□ 0.77
CLRN1P58418 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.85■□□□□ 0.77
CLRN1P58418 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.85■□□□□ 0.77
CLRN1P58418 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.85■□□□□ 0.77
CLRN1P58418 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CLRN1P58418 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLRN1P58418 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLRN1P58418 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLRN1P58418 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.84■□□□□ 0.77
CLRN1P58418 AC009102.2-201ENST00000606772 1639 ntBASIC19.84■□□□□ 0.77
CLRN1P58418 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLRN1P58418 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.84■□□□□ 0.77
CLRN1P58418 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.84■□□□□ 0.77
CLRN1P58418 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.84■□□□□ 0.77
CLRN1P58418 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLRN1P58418 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLRN1P58418 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLRN1P58418 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLRN1P58418 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLRN1P58418 LINC01529-204ENST00000636474 1715 ntBASIC19.83■□□□□ 0.77
CLRN1P58418 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLRN1P58418 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.83■□□□□ 0.77
CLRN1P58418 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.83■□□□□ 0.77
CLRN1P58418 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.83■□□□□ 0.77
CLRN1P58418 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLRN1P58418 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.83■□□□□ 0.77
CLRN1P58418 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLRN1P58418 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLRN1P58418 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLRN1P58418 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLRN1P58418 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLRN1P58418 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLRN1P58418 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
CLRN1P58418 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.76
CLRN1P58418 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLRN1P58418 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLRN1P58418 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLRN1P58418 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLRN1P58418 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLRN1P58418 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
CLRN1P58418 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CLRN1P58418 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CLRN1P58418 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms