Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.36■■□□□ 1.97
PDE1AP54750 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.36■■□□□ 1.97
PDE1AP54750 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PDE1AP54750 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PDE1AP54750 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PDE1AP54750 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDE1AP54750 AL117332.1-201ENST00000622628 974 ntBASIC27.35■■□□□ 1.97
PDE1AP54750 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.35■■□□□ 1.97
PDE1AP54750 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PDE1AP54750 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDE1AP54750 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDE1AP54750 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDE1AP54750 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
PDE1AP54750 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDE1AP54750 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDE1AP54750 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.34■■□□□ 1.97
PDE1AP54750 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
PDE1AP54750 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.34■■□□□ 1.97
PDE1AP54750 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.34■■□□□ 1.97
PDE1AP54750 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PDE1AP54750 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.33■■□□□ 1.97
PDE1AP54750 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE1AP54750 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.33■■□□□ 1.97
PDE1AP54750 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE1AP54750 AL356441.2-201ENST00000443009 864 ntBASIC27.33■■□□□ 1.97
PDE1AP54750 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
PDE1AP54750 MIR3621-201ENST00000580529 85 ntBASIC27.33■■□□□ 1.97
PDE1AP54750 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDE1AP54750 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
PDE1AP54750 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PDE1AP54750 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE1AP54750 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
PDE1AP54750 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE1AP54750 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 DUX4L4-201ENST00000566884 1269 ntBASIC27.32■■□□□ 1.96
PDE1AP54750 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.32■■□□□ 1.96
PDE1AP54750 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
PDE1AP54750 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.32■■□□□ 1.96
PDE1AP54750 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.32■■□□□ 1.96
PDE1AP54750 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDE1AP54750 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.31■■□□□ 1.96
PDE1AP54750 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE1AP54750 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.31■■□□□ 1.96
PDE1AP54750 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.31■■□□□ 1.96
PDE1AP54750 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE1AP54750 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE1AP54750 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.3■■□□□ 1.96
PDE1AP54750 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
PDE1AP54750 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PDE1AP54750 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.3■■□□□ 1.96
PDE1AP54750 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PDE1AP54750 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDE1AP54750 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDE1AP54750 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDE1AP54750 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
PDE1AP54750 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.28■■□□□ 1.96
PDE1AP54750 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE1AP54750 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.27■■□□□ 1.96
PDE1AP54750 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE1AP54750 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE1AP54750 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDE1AP54750 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE1AP54750 AL356740.2-201ENST00000601559 647 ntBASIC27.27■■□□□ 1.96
PDE1AP54750 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
PDE1AP54750 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.26■■□□□ 1.95
PDE1AP54750 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
PDE1AP54750 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC27.26■■□□□ 1.95
PDE1AP54750 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.26■■□□□ 1.95
PDE1AP54750 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE1AP54750 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PDE1AP54750 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PDE1AP54750 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PDE1AP54750 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.25■■□□□ 1.95
PDE1AP54750 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE1AP54750 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.25■■□□□ 1.95
PDE1AP54750 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE1AP54750 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE1AP54750 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE1AP54750 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms