Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2JP52435 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.34■■□□□ 1.01
POLR2JP52435 NTF6A-201ENST00000591175 560 ntBASIC21.34■■□□□ 1.01
POLR2JP52435 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
POLR2JP52435 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2JP52435 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2JP52435 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
POLR2JP52435 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2JP52435 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR2JP52435 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR2JP52435 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR2JP52435 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR2JP52435 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2JP52435 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2JP52435 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2JP52435 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2JP52435 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2JP52435 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2JP52435 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.32■■□□□ 1
POLR2JP52435 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.32■■□□□ 1
POLR2JP52435 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.32■■□□□ 1
POLR2JP52435 ABHD17AP5-201ENST00000580133 923 ntBASIC21.32■■□□□ 1
POLR2JP52435 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2JP52435 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
POLR2JP52435 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
POLR2JP52435 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.31■■□□□ 1
POLR2JP52435 PVT1_1.1-201ENST00000615125 194 ntBASIC21.31■■□□□ 1
POLR2JP52435 AC074183.2-201ENST00000623112 922 ntBASIC21.31■■□□□ 1
POLR2JP52435 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
POLR2JP52435 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.31■■□□□ 1
POLR2JP52435 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.31■■□□□ 1
POLR2JP52435 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
POLR2JP52435 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR2JP52435 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.3■■□□□ 1
POLR2JP52435 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
POLR2JP52435 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.3■■□□□ 1
POLR2JP52435 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.3■■□□□ 1
POLR2JP52435 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.3■■□□□ 1
POLR2JP52435 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR2JP52435 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR2JP52435 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.29■■□□□ 1
POLR2JP52435 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2JP52435 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2JP52435 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.29■■□□□ 1
POLR2JP52435 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
POLR2JP52435 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2JP52435 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.29■■□□□ 1
POLR2JP52435 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR2JP52435 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.29■■□□□ 1
POLR2JP52435 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.29■■□□□ 1
POLR2JP52435 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2JP52435 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
POLR2JP52435 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2JP52435 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.28■■□□□ 1
POLR2JP52435 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.28■■□□□ 1
POLR2JP52435 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.28■■□□□ 1
POLR2JP52435 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2JP52435 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
POLR2JP52435 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2JP52435 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2JP52435 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2JP52435 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.27■■□□□ 1
POLR2JP52435 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2JP52435 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2JP52435 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.27■■□□□ 1
POLR2JP52435 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR2JP52435 AC004987.1-201ENST00000428627 508 ntBASIC21.27■■□□□ 1
POLR2JP52435 ATP5G2P3-201ENST00000429083 425 ntBASIC21.27■■□□□ 1
POLR2JP52435 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.27■■□□□ 1
POLR2JP52435 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2JP52435 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.27■■□□□ 1
POLR2JP52435 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.27■□□□□ 0.99
POLR2JP52435 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
POLR2JP52435 AC139530.1-201ENST00000575312 1977 ntBASIC21.27■□□□□ 0.99
POLR2JP52435 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
POLR2JP52435 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms