Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP24386 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHMP24386 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHMP24386 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP24386 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP24386 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
CHMP24386 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMP24386 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP24386 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP24386 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.77■□□□□ 0.91
CHMP24386 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP24386 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
CHMP24386 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP24386 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP24386 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP24386 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.76■□□□□ 0.91
CHMP24386 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHMP24386 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CHMP24386 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP24386 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP24386 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP24386 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMP24386 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP24386 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMP24386 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP24386 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP24386 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP24386 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP24386 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CHMP24386 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMP24386 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP24386 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP24386 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP24386 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP24386 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP24386 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHMP24386 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP24386 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP24386 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.74■□□□□ 0.91
CHMP24386 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP24386 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP24386 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP24386 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP24386 GUSBP5-202ENST00000510805 1989 ntBASIC20.74■□□□□ 0.91
CHMP24386 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP24386 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CHMP24386 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.73■□□□□ 0.91
CHMP24386 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 LINC00526-201ENST00000581067 1875 ntBASIC20.73■□□□□ 0.91
CHMP24386 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP24386 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHMP24386 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP24386 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP24386 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CHMP24386 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 MIR3621-201ENST00000580529 85 ntBASIC20.72■□□□□ 0.91
CHMP24386 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 AL356740.2-201ENST00000601559 647 ntBASIC20.72■□□□□ 0.91
CHMP24386 AL117332.1-201ENST00000622628 974 ntBASIC20.72■□□□□ 0.91
CHMP24386 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHMP24386 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHMP24386 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP24386 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP24386 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHMP24386 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHMP24386 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.71■□□□□ 0.91
CHMP24386 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.71■□□□□ 0.91
CHMP24386 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms