Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRNB2P17787 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.77■■□□□ 1.4
CHRNB2P17787 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHRNB2P17787 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
CHRNB2P17787 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNB2P17787 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.76■■□□□ 1.39
CHRNB2P17787 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.76■■□□□ 1.39
CHRNB2P17787 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNB2P17787 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHRNB2P17787 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNB2P17787 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CHRNB2P17787 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHRNB2P17787 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNB2P17787 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNB2P17787 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNB2P17787 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHRNB2P17787 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNB2P17787 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNB2P17787 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNB2P17787 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CHRNB2P17787 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNB2P17787 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNB2P17787 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.74■■□□□ 1.39
CHRNB2P17787 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNB2P17787 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.73■■□□□ 1.39
CHRNB2P17787 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.73■■□□□ 1.39
CHRNB2P17787 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNB2P17787 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.73■■□□□ 1.39
CHRNB2P17787 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNB2P17787 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNB2P17787 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.73■■□□□ 1.39
CHRNB2P17787 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CHRNB2P17787 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNB2P17787 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNB2P17787 FP325331.1-202ENST00000623531 1380 ntBASIC23.72■■□□□ 1.39
CHRNB2P17787 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.72■■□□□ 1.39
CHRNB2P17787 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNB2P17787 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNB2P17787 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNB2P17787 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNB2P17787 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.72■■□□□ 1.39
CHRNB2P17787 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.72■■□□□ 1.39
CHRNB2P17787 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 AL117328.2-201ENST00000624617 1940 ntBASIC23.71■■□□□ 1.39
CHRNB2P17787 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 LINC01529-204ENST00000636474 1715 ntBASIC23.71■■□□□ 1.39
CHRNB2P17787 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CHRNB2P17787 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.71■■□□□ 1.39
CHRNB2P17787 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.71■■□□□ 1.39
CHRNB2P17787 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.71■■□□□ 1.39
CHRNB2P17787 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNB2P17787 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.71■■□□□ 1.39
CHRNB2P17787 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.7■■□□□ 1.39
CHRNB2P17787 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHRNB2P17787 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CHRNB2P17787 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CHRNB2P17787 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CHRNB2P17787 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHRNB2P17787 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNB2P17787 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CHRNB2P17787 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.69■■□□□ 1.38
CHRNB2P17787 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.69■■□□□ 1.38
CHRNB2P17787 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.69■■□□□ 1.38
CHRNB2P17787 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CHRNB2P17787 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.69■■□□□ 1.38
CHRNB2P17787 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CHRNB2P17787 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNB2P17787 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.68■■□□□ 1.38
CHRNB2P17787 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CHRNB2P17787 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CHRNB2P17787 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.68■■□□□ 1.38
CHRNB2P17787 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CHRNB2P17787 MIR6724-1-201ENST00000616420 92 ntBASIC23.68■■□□□ 1.38
CHRNB2P17787 MIR6724-2-201ENST00000616483 92 ntBASIC23.68■■□□□ 1.38
CHRNB2P17787 MIR6724-4-201ENST00000617390 92 ntBASIC23.68■■□□□ 1.38
CHRNB2P17787 MIR6724-3-201ENST00000622482 92 ntBASIC23.68■■□□□ 1.38
CHRNB2P17787 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 AC079834.2-201ENST00000609776 1949 ntBASIC23.68■■□□□ 1.38
CHRNB2P17787 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNB2P17787 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNB2P17787 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNB2P17787 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.67■■□□□ 1.38
CHRNB2P17787 GUSBP5-201ENST00000418136 578 ntBASIC23.67■■□□□ 1.38
CHRNB2P17787 DUX4L4-201ENST00000566884 1269 ntBASIC23.67■■□□□ 1.38
CHRNB2P17787 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNB2P17787 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.67■■□□□ 1.38
CHRNB2P17787 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHRNB2P17787 C17orf82-201ENST00000623772 1530 ntBASIC23.67■■□□□ 1.38
CHRNB2P17787 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms