Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 DUX4L24-201ENST00000617576 1269 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 DUX4L22-201ENST00000618238 1269 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 DUX4L20-201ENST00000619712 1269 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 DUX4L21-201ENST00000622058 1269 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 DUX4L10-201ENST00000622460 1267 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 DUX4L25-201ENST00000624915 1269 ntBASIC23.31■■□□□ 1.32
H2AFXP16104 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2AFXP16104 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2AFXP16104 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.31■■□□□ 1.32
H2AFXP16104 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
H2AFXP16104 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2AFXP16104 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2AFXP16104 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
H2AFXP16104 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
H2AFXP16104 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
H2AFXP16104 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.3■■□□□ 1.32
H2AFXP16104 AC087742.1-201ENST00000575880 1738 ntBASIC23.3■■□□□ 1.32
H2AFXP16104 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2AFXP16104 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.29■■□□□ 1.32
H2AFXP16104 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
H2AFXP16104 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
H2AFXP16104 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.29■■□□□ 1.32
H2AFXP16104 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
H2AFXP16104 AC025884.2-201ENST00000553429 711 ntBASIC23.29■■□□□ 1.32
H2AFXP16104 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
H2AFXP16104 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
H2AFXP16104 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
H2AFXP16104 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 AC007952.6-201ENST00000573168 2673 ntBASIC23.28■■□□□ 1.32
H2AFXP16104 AC003957.1-201ENST00000625108 2673 ntBASIC23.28■■□□□ 1.32
H2AFXP16104 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
H2AFXP16104 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2AFXP16104 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
H2AFXP16104 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.27■■□□□ 1.32
H2AFXP16104 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
H2AFXP16104 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
H2AFXP16104 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
H2AFXP16104 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
H2AFXP16104 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.27■■□□□ 1.32
H2AFXP16104 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.27■■□□□ 1.32
H2AFXP16104 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.27■■□□□ 1.32
H2AFXP16104 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
H2AFXP16104 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.26■■□□□ 1.31
H2AFXP16104 DUX4L29-201ENST00000425409 679 ntBASIC23.26■■□□□ 1.31
H2AFXP16104 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.26■■□□□ 1.31
H2AFXP16104 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
H2AFXP16104 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
H2AFXP16104 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
H2AFXP16104 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.25■■□□□ 1.31
H2AFXP16104 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
H2AFXP16104 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.25■■□□□ 1.31
H2AFXP16104 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H2AFXP16104 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.24■■□□□ 1.31
H2AFXP16104 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
H2AFXP16104 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
H2AFXP16104 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H2AFXP16104 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.24■■□□□ 1.31
H2AFXP16104 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.24■■□□□ 1.31
H2AFXP16104 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
H2AFXP16104 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
H2AFXP16104 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
H2AFXP16104 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
H2AFXP16104 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
H2AFXP16104 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.23■■□□□ 1.31
H2AFXP16104 MIR3960-201ENST00000583311 91 ntBASIC23.23■■□□□ 1.31
H2AFXP16104 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2AFXP16104 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.22■■□□□ 1.31
H2AFXP16104 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
H2AFXP16104 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
H2AFXP16104 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.22■■□□□ 1.31
H2AFXP16104 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms