Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCL4P13236 AC123595.1-201ENST00000440769 1046 ntBASIC21.26■□□□□ 0.99
CCL4P13236 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.26■□□□□ 0.99
CCL4P13236 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
CCL4P13236 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.26■□□□□ 0.99
CCL4P13236 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.26■□□□□ 0.99
CCL4P13236 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCL4P13236 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.25■□□□□ 0.99
CCL4P13236 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCL4P13236 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCL4P13236 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.25■□□□□ 0.99
CCL4P13236 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCL4P13236 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 AL354811.1-201ENST00000610286 706 ntBASIC21.25■□□□□ 0.99
CCL4P13236 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCL4P13236 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.24■□□□□ 0.99
CCL4P13236 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCL4P13236 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.24■□□□□ 0.99
CCL4P13236 OR2I1P-207ENST00000453522 948 ntBASIC21.24■□□□□ 0.99
CCL4P13236 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.24■□□□□ 0.99
CCL4P13236 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 AC090192.1-201ENST00000517740 490 ntBASIC21.24■□□□□ 0.99
CCL4P13236 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.24■□□□□ 0.99
CCL4P13236 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.24■□□□□ 0.99
CCL4P13236 RARRES2P11-201ENST00000635158 484 ntBASIC21.24■□□□□ 0.99
CCL4P13236 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.24■□□□□ 0.99
CCL4P13236 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.24■□□□□ 0.99
CCL4P13236 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CCL4P13236 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCL4P13236 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCL4P13236 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.23■□□□□ 0.99
CCL4P13236 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.23■□□□□ 0.99
CCL4P13236 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.23■□□□□ 0.99
CCL4P13236 AC092437.1-201ENST00000624794 1048 ntBASIC21.23■□□□□ 0.99
CCL4P13236 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.23■□□□□ 0.99
CCL4P13236 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.23■□□□□ 0.99
CCL4P13236 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCL4P13236 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCL4P13236 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCL4P13236 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCL4P13236 LINC01529-204ENST00000636474 1715 ntBASIC21.22■□□□□ 0.99
CCL4P13236 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCL4P13236 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.22■□□□□ 0.99
CCL4P13236 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.22■□□□□ 0.99
CCL4P13236 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.22■□□□□ 0.99
CCL4P13236 CCDC92B-201ENST00000575506 885 ntBASIC21.22■□□□□ 0.99
CCL4P13236 AL137784.2-201ENST00000607332 1000 ntBASIC21.22■□□□□ 0.99
CCL4P13236 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.22■□□□□ 0.99
CCL4P13236 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCL4P13236 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.22■□□□□ 0.99
CCL4P13236 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
CCL4P13236 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCL4P13236 AC144652.1-201ENST00000609974 1624 ntBASIC21.22■□□□□ 0.99
CCL4P13236 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.21■□□□□ 0.99
CCL4P13236 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCL4P13236 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.21■□□□□ 0.99
CCL4P13236 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCL4P13236 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL4P13236 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
CCL4P13236 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CCL4P13236 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
CCL4P13236 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.2■□□□□ 0.98
CCL4P13236 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.2■□□□□ 0.98
CCL4P13236 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCL4P13236 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCL4P13236 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL4P13236 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCL4P13236 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms