Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PF4V1P10720 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PF4V1P10720 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.6■□□□□ 0.41
PF4V1P10720 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PF4V1P10720 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PF4V1P10720 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PF4V1P10720 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PF4V1P10720 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PF4V1P10720 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.59■□□□□ 0.41
PF4V1P10720 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
PF4V1P10720 SUDS3P1-201ENST00000505831 966 ntBASIC17.59■□□□□ 0.41
PF4V1P10720 AF213884.3-201ENST00000563833 479 ntBASIC17.59■□□□□ 0.41
PF4V1P10720 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.59■□□□□ 0.41
PF4V1P10720 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PF4V1P10720 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PF4V1P10720 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PF4V1P10720 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.58■□□□□ 0.41
PF4V1P10720 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PF4V1P10720 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PF4V1P10720 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PF4V1P10720 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PF4V1P10720 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PF4V1P10720 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PF4V1P10720 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PF4V1P10720 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.58■□□□□ 0.4
PF4V1P10720 AC105265.2-201ENST00000467189 838 ntBASIC17.58■□□□□ 0.4
PF4V1P10720 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.58■□□□□ 0.4
PF4V1P10720 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.58■□□□□ 0.4
PF4V1P10720 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.58■□□□□ 0.4
PF4V1P10720 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.58■□□□□ 0.4
PF4V1P10720 AC099791.2-201ENST00000605725 427 ntBASIC17.58■□□□□ 0.4
PF4V1P10720 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PF4V1P10720 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PF4V1P10720 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.57■□□□□ 0.4
PF4V1P10720 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 AL031432.3-201ENST00000607698 485 ntBASIC17.57■□□□□ 0.4
PF4V1P10720 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PF4V1P10720 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PF4V1P10720 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PF4V1P10720 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PF4V1P10720 C17orf82-201ENST00000623772 1530 ntBASIC17.57■□□□□ 0.4
PF4V1P10720 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 RARRES2P6-201ENST00000567333 442 ntBASIC17.56■□□□□ 0.4
PF4V1P10720 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.56■□□□□ 0.4
PF4V1P10720 MIR4767-201ENST00000582827 78 ntBASIC17.56■□□□□ 0.4
PF4V1P10720 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.56■□□□□ 0.4
PF4V1P10720 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.56■□□□□ 0.4
PF4V1P10720 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PF4V1P10720 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PF4V1P10720 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.56■□□□□ 0.4
PF4V1P10720 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PF4V1P10720 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PF4V1P10720 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PF4V1P10720 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PF4V1P10720 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PF4V1P10720 AC091305.1-201ENST00000479476 895 ntBASIC17.55■□□□□ 0.4
PF4V1P10720 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.55■□□□□ 0.4
PF4V1P10720 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.55■□□□□ 0.4
PF4V1P10720 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.55■□□□□ 0.4
PF4V1P10720 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PF4V1P10720 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 SERBP1P1-201ENST00000396021 1160 ntBASIC17.54■□□□□ 0.4
PF4V1P10720 AP001330.3-201ENST00000520123 633 ntBASIC17.54■□□□□ 0.4
PF4V1P10720 AC241377.3-202ENST00000626088 1088 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms