Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RBP1P09455 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.97■■□□□ 1.11
RBP1P09455 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.97■■□□□ 1.11
RBP1P09455 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.97■■□□□ 1.11
RBP1P09455 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.97■■□□□ 1.11
RBP1P09455 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RBP1P09455 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.96■■□□□ 1.11
RBP1P09455 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.96■■□□□ 1.11
RBP1P09455 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.96■■□□□ 1.11
RBP1P09455 AL031848.2-201ENST00000607670 837 ntBASIC21.96■■□□□ 1.11
RBP1P09455 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.96■■□□□ 1.11
RBP1P09455 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RBP1P09455 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RBP1P09455 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.96■■□□□ 1.11
RBP1P09455 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.95■■□□□ 1.1
RBP1P09455 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 AC127496.7-201ENST00000625110 1798 ntBASIC21.95■■□□□ 1.1
RBP1P09455 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RBP1P09455 AC242852.2-201ENST00000615738 1807 ntBASIC21.95■■□□□ 1.1
RBP1P09455 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.95■■□□□ 1.1
RBP1P09455 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.95■■□□□ 1.1
RBP1P09455 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.95■■□□□ 1.1
RBP1P09455 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RBP1P09455 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.94■■□□□ 1.1
RBP1P09455 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.94■■□□□ 1.1
RBP1P09455 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RBP1P09455 MIR6722-201ENST00000617286 78 ntBASIC21.94■■□□□ 1.1
RBP1P09455 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.94■■□□□ 1.1
RBP1P09455 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RBP1P09455 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RBP1P09455 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RBP1P09455 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RBP1P09455 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RBP1P09455 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RBP1P09455 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RBP1P09455 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.93■■□□□ 1.1
RBP1P09455 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.93■■□□□ 1.1
RBP1P09455 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.93■■□□□ 1.1
RBP1P09455 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RBP1P09455 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.92■■□□□ 1.1
RBP1P09455 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RBP1P09455 AC005703.6-201ENST00000623265 1329 ntBASIC21.92■■□□□ 1.1
RBP1P09455 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
RBP1P09455 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.92■■□□□ 1.1
RBP1P09455 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RBP1P09455 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RBP1P09455 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RBP1P09455 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.92■■□□□ 1.1
RBP1P09455 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RBP1P09455 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.91■■□□□ 1.1
RBP1P09455 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RBP1P09455 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RBP1P09455 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 AC021242.3-201ENST00000607598 1377 ntBASIC21.9■■□□□ 1.1
RBP1P09455 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RBP1P09455 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.9■■□□□ 1.1
RBP1P09455 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RBP1P09455 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.9■■□□□ 1.1
RBP1P09455 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RBP1P09455 LINC00565-201ENST00000562710 2331 ntBASIC21.9■■□□□ 1.1
RBP1P09455 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
RBP1P09455 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RBP1P09455 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RBP1P09455 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RBP1P09455 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms