Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD48P09326 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD48P09326 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CD48P09326 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.16■■□□□ 1.3
CD48P09326 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CD48P09326 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.16■■□□□ 1.3
CD48P09326 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CD48P09326 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.16■■□□□ 1.3
CD48P09326 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 AC233723.2-201ENST00000623798 2106 ntBASIC23.16■■□□□ 1.3
CD48P09326 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.16■■□□□ 1.3
CD48P09326 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD48P09326 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CD48P09326 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.15■■□□□ 1.3
CD48P09326 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CD48P09326 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.15■■□□□ 1.3
CD48P09326 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.15■■□□□ 1.3
CD48P09326 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.15■■□□□ 1.3
CD48P09326 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CD48P09326 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CD48P09326 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CD48P09326 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CD48P09326 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.14■■□□□ 1.3
CD48P09326 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CD48P09326 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.14■■□□□ 1.29
CD48P09326 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CD48P09326 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CD48P09326 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD48P09326 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CD48P09326 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
CD48P09326 KRT16P3-201ENST00000439127 1283 ntBASIC23.13■■□□□ 1.29
CD48P09326 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.13■■□□□ 1.29
CD48P09326 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.13■■□□□ 1.29
CD48P09326 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.13■■□□□ 1.29
CD48P09326 MIR6724-1-201ENST00000616420 92 ntBASIC23.13■■□□□ 1.29
CD48P09326 MIR6724-2-201ENST00000616483 92 ntBASIC23.13■■□□□ 1.29
CD48P09326 MIR6724-4-201ENST00000617390 92 ntBASIC23.13■■□□□ 1.29
CD48P09326 MIR6724-3-201ENST00000622482 92 ntBASIC23.13■■□□□ 1.29
CD48P09326 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.13■■□□□ 1.29
CD48P09326 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.13■■□□□ 1.29
CD48P09326 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
CD48P09326 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD48P09326 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.13■■□□□ 1.29
CD48P09326 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CD48P09326 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.12■■□□□ 1.29
CD48P09326 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CD48P09326 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CD48P09326 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CD48P09326 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CD48P09326 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CD48P09326 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CD48P09326 LINC01529-204ENST00000636474 1715 ntBASIC23.11■■□□□ 1.29
CD48P09326 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CD48P09326 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CD48P09326 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.1■■□□□ 1.29
CD48P09326 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.1■■□□□ 1.29
CD48P09326 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.1■■□□□ 1.29
CD48P09326 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CD48P09326 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.1■■□□□ 1.29
CD48P09326 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CD48P09326 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CD48P09326 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CD48P09326 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.09■■□□□ 1.29
CD48P09326 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.09■■□□□ 1.29
CD48P09326 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.09■■□□□ 1.29
CD48P09326 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.09■■□□□ 1.29
CD48P09326 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CD48P09326 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.08■■□□□ 1.29
CD48P09326 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CD48P09326 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.08■■□□□ 1.29
CD48P09326 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.08■■□□□ 1.29
CD48P09326 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CD48P09326 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CD48P09326 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CD48P09326 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CD48P09326 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CD48P09326 C17orf82-201ENST00000623772 1530 ntBASIC23.08■■□□□ 1.28
CD48P09326 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.07■■□□□ 1.28
CD48P09326 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CD48P09326 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD48P09326 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.07■■□□□ 1.28
CD48P09326 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.07■■□□□ 1.28
CD48P09326 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms