Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 AL512631.2-201ENST00000604634 923 ntBASIC21.9■■□□□ 1.1
CAPN1P07384 MIR6722-201ENST00000617286 78 ntBASIC21.9■■□□□ 1.1
CAPN1P07384 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.9■■□□□ 1.1
CAPN1P07384 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
CAPN1P07384 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN1P07384 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.89■■□□□ 1.1
CAPN1P07384 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN1P07384 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN1P07384 AL136116.3-201ENST00000402907 1138 ntBASIC21.89■■□□□ 1.09
CAPN1P07384 AC004448.1-201ENST00000458332 883 ntBASIC21.89■■□□□ 1.09
CAPN1P07384 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.89■■□□□ 1.09
CAPN1P07384 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.89■■□□□ 1.09
CAPN1P07384 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.89■■□□□ 1.09
CAPN1P07384 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN1P07384 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN1P07384 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN1P07384 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN1P07384 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CAPN1P07384 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN1P07384 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.88■■□□□ 1.09
CAPN1P07384 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN1P07384 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.88■■□□□ 1.09
CAPN1P07384 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CAPN1P07384 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN1P07384 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN1P07384 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN1P07384 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN1P07384 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN1P07384 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN1P07384 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CAPN1P07384 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CAPN1P07384 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN1P07384 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN1P07384 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN1P07384 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN1P07384 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN1P07384 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
CAPN1P07384 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN1P07384 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN1P07384 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CAPN1P07384 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN1P07384 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.86■■□□□ 1.09
CAPN1P07384 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN1P07384 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CAPN1P07384 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.85■■□□□ 1.09
CAPN1P07384 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.85■■□□□ 1.09
CAPN1P07384 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN1P07384 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN1P07384 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN1P07384 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN1P07384 MIR638-201ENST00000385237 100 ntBASIC21.84■■□□□ 1.09
CAPN1P07384 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CAPN1P07384 AL139246.5-201ENST00000606645 996 ntBASIC21.84■■□□□ 1.09
CAPN1P07384 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CAPN1P07384 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN1P07384 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN1P07384 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CAPN1P07384 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CAPN1P07384 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPN1P07384 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN1P07384 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPN1P07384 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN1P07384 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN1P07384 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.83■■□□□ 1.08
CAPN1P07384 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
CAPN1P07384 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN1P07384 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 C1orf229-201ENST00000623686 2258 ntBASIC21.82■■□□□ 1.08
CAPN1P07384 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN1P07384 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN1P07384 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN1P07384 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN1P07384 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN1P07384 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CAPN1P07384 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CAPN1P07384 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN1P07384 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CAPN1P07384 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms