Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
P04436 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04436 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.41■□□□□ 0.86
P04436 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04436 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04436 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04436 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04436 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04436 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04436 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04436 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.4■□□□□ 0.86
P04436 AL499627.2-201ENST00000606283 725 ntBASIC20.4■□□□□ 0.86
P04436 AC133637.1-201ENST00000624115 1537 ntBASIC20.4■□□□□ 0.86
P04436 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.39■□□□□ 0.86
P04436 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
P04436 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04436 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
P04436 RASA4CP-201ENST00000424092 1398 ntBASIC20.39■□□□□ 0.85
P04436 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.39■□□□□ 0.85
P04436 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
P04436 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04436 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04436 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
P04436 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P04436 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
P04436 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04436 AC079630.1-202ENST00000618127 1840 ntBASIC20.39■□□□□ 0.85
P04436 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 AC099791.1-201ENST00000416440 715 ntBASIC20.38■□□□□ 0.85
P04436 BX842568.3-201ENST00000418104 571 ntBASIC20.38■□□□□ 0.85
P04436 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.38■□□□□ 0.85
P04436 AC233992.3-201ENST00000607491 485 ntBASIC20.38■□□□□ 0.85
P04436 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
P04436 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
P04436 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04436 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.37■□□□□ 0.85
P04436 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.37■□□□□ 0.85
P04436 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.37■□□□□ 0.85
P04436 CA15P2-201ENST00000611168 834 ntBASIC20.37■□□□□ 0.85
P04436 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
P04436 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04436 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.37■□□□□ 0.85
P04436 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
P04436 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
P04436 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04436 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04436 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
P04436 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04436 AC105265.2-201ENST00000467189 838 ntBASIC20.36■□□□□ 0.85
P04436 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.36■□□□□ 0.85
P04436 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04436 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04436 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.35■□□□□ 0.85
P04436 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04436 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.35■□□□□ 0.85
P04436 MIR935-201ENST00000401179 91 ntBASIC20.35■□□□□ 0.85
P04436 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.35■□□□□ 0.85
P04436 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.35■□□□□ 0.85
P04436 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.35■□□□□ 0.85
P04436 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04436 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04436 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.35■□□□□ 0.85
P04436 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
P04436 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
P04436 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
P04436 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.34■□□□□ 0.85
P04436 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.34■□□□□ 0.85
P04436 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
P04436 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.34■□□□□ 0.85
P04436 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04436 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.33■□□□□ 0.85
P04436 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.33■□□□□ 0.85
P04436 AC126544.1-201ENST00000580842 1059 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms