Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LCATP04180 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.45■□□□□ 0.7
LCATP04180 AC012676.1-201ENST00000574705 1949 ntBASIC19.45■□□□□ 0.7
LCATP04180 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.45■□□□□ 0.7
LCATP04180 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 UNC93B8-201ENST00000511903 705 ntBASIC19.45■□□□□ 0.7
LCATP04180 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCATP04180 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCATP04180 PKD1P6-201ENST00000343738 4769 ntBASIC19.44■□□□□ 0.7
LCATP04180 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCATP04180 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.44■□□□□ 0.7
LCATP04180 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.44■□□□□ 0.7
LCATP04180 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.44■□□□□ 0.7
LCATP04180 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCATP04180 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LCATP04180 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCATP04180 AL353803.4-201ENST00000565882 1934 ntBASIC19.44■□□□□ 0.7
LCATP04180 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCATP04180 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
LCATP04180 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LCATP04180 AC144652.1-201ENST00000609974 1624 ntBASIC19.43■□□□□ 0.7
LCATP04180 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.43■□□□□ 0.7
LCATP04180 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.43■□□□□ 0.7
LCATP04180 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
LCATP04180 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
LCATP04180 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.43■□□□□ 0.7
LCATP04180 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCATP04180 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCATP04180 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCATP04180 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCATP04180 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.42■□□□□ 0.7
LCATP04180 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCATP04180 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCATP04180 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.42■□□□□ 0.7
LCATP04180 KRT16P3-201ENST00000439127 1283 ntBASIC19.42■□□□□ 0.7
LCATP04180 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LCATP04180 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.42■□□□□ 0.7
LCATP04180 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.42■□□□□ 0.7
LCATP04180 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LCATP04180 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LCATP04180 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LCATP04180 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LCATP04180 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.41■□□□□ 0.7
LCATP04180 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.41■□□□□ 0.7
LCATP04180 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.41■□□□□ 0.7
LCATP04180 MIR6724-1-201ENST00000616420 92 ntBASIC19.41■□□□□ 0.7
LCATP04180 MIR6724-2-201ENST00000616483 92 ntBASIC19.41■□□□□ 0.7
LCATP04180 MIR6724-4-201ENST00000617390 92 ntBASIC19.41■□□□□ 0.7
LCATP04180 MIR6724-3-201ENST00000622482 92 ntBASIC19.41■□□□□ 0.7
LCATP04180 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.41■□□□□ 0.7
LCATP04180 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LCATP04180 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.41■□□□□ 0.7
LCATP04180 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LCATP04180 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCATP04180 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LCATP04180 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LCATP04180 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LCATP04180 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LCATP04180 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LCATP04180 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
LCATP04180 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.4■□□□□ 0.7
LCATP04180 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LCATP04180 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCATP04180 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCATP04180 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LCATP04180 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.39■□□□□ 0.69
LCATP04180 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
LCATP04180 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCATP04180 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LCATP04180 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCATP04180 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms