Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.65■■□□□ 1.22
MT-ND3P03897 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND3P03897 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.65■■□□□ 1.22
MT-ND3P03897 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND3P03897 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND3P03897 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND3P03897 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND3P03897 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND3P03897 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
MT-ND3P03897 AC127496.7-201ENST00000625110 1798 ntBASIC22.64■■□□□ 1.22
MT-ND3P03897 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.64■■□□□ 1.21
MT-ND3P03897 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
MT-ND3P03897 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.64■■□□□ 1.21
MT-ND3P03897 AL356441.2-201ENST00000443009 864 ntBASIC22.64■■□□□ 1.21
MT-ND3P03897 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.64■■□□□ 1.21
MT-ND3P03897 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.64■■□□□ 1.21
MT-ND3P03897 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.64■■□□□ 1.21
MT-ND3P03897 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND3P03897 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.63■■□□□ 1.21
MT-ND3P03897 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
MT-ND3P03897 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.63■■□□□ 1.21
MT-ND3P03897 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.63■■□□□ 1.21
MT-ND3P03897 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
MT-ND3P03897 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND3P03897 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
MT-ND3P03897 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-ND3P03897 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-ND3P03897 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-ND3P03897 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND3P03897 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-ND3P03897 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.62■■□□□ 1.21
MT-ND3P03897 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND3P03897 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND3P03897 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND3P03897 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
MT-ND3P03897 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
MT-ND3P03897 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
MT-ND3P03897 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND3P03897 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND3P03897 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.61■■□□□ 1.21
MT-ND3P03897 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.61■■□□□ 1.21
MT-ND3P03897 AC131274.2-201ENST00000580697 1507 ntBASIC22.61■■□□□ 1.21
MT-ND3P03897 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
MT-ND3P03897 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.6■■□□□ 1.21
MT-ND3P03897 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.6■■□□□ 1.21
MT-ND3P03897 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
MT-ND3P03897 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
MT-ND3P03897 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND3P03897 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND3P03897 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
MT-ND3P03897 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND3P03897 MIR4787-201ENST00000607364 84 ntBASIC22.59■■□□□ 1.21
MT-ND3P03897 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND3P03897 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND3P03897 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND3P03897 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND3P03897 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MT-ND3P03897 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.58■■□□□ 1.21
MT-ND3P03897 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND3P03897 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MT-ND3P03897 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
MT-ND3P03897 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.58■■□□□ 1.21
MT-ND3P03897 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND3P03897 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND3P03897 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND3P03897 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND3P03897 AC137630.3-201ENST00000607245 391 ntBASIC22.57■■□□□ 1.2
MT-ND3P03897 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND3P03897 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms