Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MT-ND1P03886 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND1P03886 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MT-ND1P03886 AC131274.2-201ENST00000580697 1507 ntBASIC20.99■□□□□ 0.95
MT-ND1P03886 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MT-ND1P03886 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-ND1P03886 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 ABHD17AP5-201ENST00000580133 923 ntBASIC20.98■□□□□ 0.95
MT-ND1P03886 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-ND1P03886 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MT-ND1P03886 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND1P03886 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-ND1P03886 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-ND1P03886 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MT-ND1P03886 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MT-ND1P03886 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MT-ND1P03886 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-ND1P03886 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-ND1P03886 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
MT-ND1P03886 AC079630.1-202ENST00000618127 1840 ntBASIC20.97■□□□□ 0.95
MT-ND1P03886 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND1P03886 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MT-ND1P03886 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MT-ND1P03886 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND1P03886 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.95■□□□□ 0.94
MT-ND1P03886 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.95■□□□□ 0.94
MT-ND1P03886 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MT-ND1P03886 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.95■□□□□ 0.94
MT-ND1P03886 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND1P03886 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
MT-ND1P03886 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
MT-ND1P03886 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.94■□□□□ 0.94
MT-ND1P03886 NTF6A-201ENST00000591175 560 ntBASIC20.94■□□□□ 0.94
MT-ND1P03886 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.94■□□□□ 0.94
MT-ND1P03886 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND1P03886 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MT-ND1P03886 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND1P03886 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND1P03886 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.93■□□□□ 0.94
MT-ND1P03886 AC139530.1-201ENST00000575312 1977 ntBASIC20.93■□□□□ 0.94
MT-ND1P03886 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND1P03886 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MT-ND1P03886 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND1P03886 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.93■□□□□ 0.94
MT-ND1P03886 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.93■□□□□ 0.94
MT-ND1P03886 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND1P03886 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
MT-ND1P03886 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND1P03886 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MT-ND1P03886 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND1P03886 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.92■□□□□ 0.94
MT-ND1P03886 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.92■□□□□ 0.94
MT-ND1P03886 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MT-ND1P03886 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND1P03886 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND1P03886 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND1P03886 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.92■□□□□ 0.94
MT-ND1P03886 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms