Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC079630.1-202ENST00000618127 1840 ntBASIC19.32■□□□□ 0.68
HLA-DQB1P01920 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DQB1P01920 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 AC080038.3-201ENST00000623346 1952 ntBASIC19.31■□□□□ 0.68
HLA-DQB1P01920 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB1P01920 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 AC007029.1-201ENST00000604183 313 ntBASIC19.3■□□□□ 0.68
HLA-DQB1P01920 RAP2CP1-202ENST00000605179 643 ntBASIC19.3■□□□□ 0.68
HLA-DQB1P01920 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB1P01920 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB1P01920 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 AC026202.3-201ENST00000600805 1127 ntBASIC19.28■□□□□ 0.68
HLA-DQB1P01920 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 FAM99A-202ENST00000538190 1989 ntBASIC19.28■□□□□ 0.68
HLA-DQB1P01920 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB1P01920 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.27■□□□□ 0.68
HLA-DQB1P01920 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
HLA-DQB1P01920 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DQB1P01920 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DQB1P01920 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DQB1P01920 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HLA-DQB1P01920 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms