Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-AP01891 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-AP01891 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-AP01891 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-AP01891 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
HLA-AP01891 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-AP01891 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.77■□□□□ 0.6
HLA-AP01891 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-AP01891 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-AP01891 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-AP01891 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-AP01891 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-AP01891 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-AP01891 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-AP01891 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HLA-AP01891 RNF126P1-201ENST00000567452 1320 ntBASIC18.76■□□□□ 0.59
HLA-AP01891 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-AP01891 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HLA-AP01891 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-AP01891 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.76■□□□□ 0.59
HLA-AP01891 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-AP01891 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-AP01891 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-AP01891 FBXW4P1-201ENST00000426721 2239 ntBASIC18.76■□□□□ 0.59
HLA-AP01891 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HLA-AP01891 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-AP01891 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-AP01891 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HLA-AP01891 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-AP01891 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-AP01891 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-AP01891 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HLA-AP01891 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-AP01891 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 AC139530.1-201ENST00000575312 1977 ntBASIC18.73■□□□□ 0.59
HLA-AP01891 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-AP01891 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HLA-AP01891 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-AP01891 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-AP01891 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-AP01891 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-AP01891 RP9P-202ENST00000450133 1212 ntBASIC18.72■□□□□ 0.59
HLA-AP01891 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-AP01891 AC007029.1-201ENST00000604183 313 ntBASIC18.72■□□□□ 0.59
HLA-AP01891 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-AP01891 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-AP01891 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-AP01891 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-AP01891 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-AP01891 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HLA-AP01891 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HLA-AP01891 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 RARRES2P2-201ENST00000394842 485 ntBASIC18.71■□□□□ 0.59
HLA-AP01891 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-AP01891 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-AP01891 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-AP01891 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-AP01891 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms