Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLIC3O95833 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIC3O95833 AC092296.2-201ENST00000589470 999 ntBASIC20.61■□□□□ 0.89
CLIC3O95833 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC3O95833 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLIC3O95833 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIC3O95833 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC3O95833 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC3O95833 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC3O95833 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC3O95833 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLIC3O95833 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CLIC3O95833 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLIC3O95833 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC3O95833 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC3O95833 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC3O95833 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC3O95833 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC3O95833 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC3O95833 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC3O95833 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC3O95833 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLIC3O95833 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC3O95833 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC3O95833 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.58■□□□□ 0.88
CLIC3O95833 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLIC3O95833 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC3O95833 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CLIC3O95833 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIC3O95833 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLIC3O95833 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC3O95833 KRT18P10-201ENST00000388836 1287 ntBASIC20.57■□□□□ 0.88
CLIC3O95833 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLIC3O95833 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC3O95833 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC3O95833 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIC3O95833 AC005229.4-201ENST00000610085 2198 ntBASIC20.56■□□□□ 0.88
CLIC3O95833 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CLIC3O95833 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIC3O95833 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIC3O95833 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIC3O95833 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC3O95833 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIC3O95833 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC3O95833 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC3O95833 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CLIC3O95833 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.55■□□□□ 0.88
CLIC3O95833 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC3O95833 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC3O95833 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLIC3O95833 ALDH1A3-203ENST00000557963 1670 ntBASIC20.54■□□□□ 0.88
CLIC3O95833 FAM99A-202ENST00000538190 1989 ntBASIC20.54■□□□□ 0.88
CLIC3O95833 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CLIC3O95833 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC3O95833 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC3O95833 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLIC3O95833 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLIC3O95833 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC3O95833 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC3O95833 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms