Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.34■■□□□ 1.65
TDP2O95551 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.34■■□□□ 1.65
TDP2O95551 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.34■■□□□ 1.65
TDP2O95551 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TDP2O95551 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TDP2O95551 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.34■■□□□ 1.65
TDP2O95551 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TDP2O95551 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.33■■□□□ 1.65
TDP2O95551 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TDP2O95551 AC110285.6-201ENST00000617652 491 ntBASIC25.33■■□□□ 1.65
TDP2O95551 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TDP2O95551 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TDP2O95551 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.33■■□□□ 1.65
TDP2O95551 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TDP2O95551 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TDP2O95551 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.33■■□□□ 1.64
TDP2O95551 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.32■■□□□ 1.64
TDP2O95551 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 UNC93B3-201ENST00000308076 687 ntBASIC25.32■■□□□ 1.64
TDP2O95551 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.32■■□□□ 1.64
TDP2O95551 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TDP2O95551 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.32■■□□□ 1.64
TDP2O95551 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TDP2O95551 SYT6-210ENST00000641643 1587 ntBASIC25.31■■□□□ 1.64
TDP2O95551 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.31■■□□□ 1.64
TDP2O95551 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
TDP2O95551 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.31■■□□□ 1.64
TDP2O95551 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.31■■□□□ 1.64
TDP2O95551 MIR3181-201ENST00000578512 73 ntBASIC25.31■■□□□ 1.64
TDP2O95551 pRNA.6-201ENST00000610482 90 ntBASIC25.31■■□□□ 1.64
TDP2O95551 pRNA.5-201ENST00000612139 90 ntBASIC25.31■■□□□ 1.64
TDP2O95551 pRNA.11-201ENST00000618423 90 ntBASIC25.31■■□□□ 1.64
TDP2O95551 pRNA.13-201ENST00000619112 90 ntBASIC25.31■■□□□ 1.64
TDP2O95551 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TDP2O95551 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.31■■□□□ 1.64
TDP2O95551 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TDP2O95551 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
TDP2O95551 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.3■■□□□ 1.64
TDP2O95551 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
TDP2O95551 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TDP2O95551 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TDP2O95551 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.3■■□□□ 1.64
TDP2O95551 AC092171.4-201ENST00000609130 632 ntBASIC25.3■■□□□ 1.64
TDP2O95551 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TDP2O95551 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TDP2O95551 DUSP8P3-201ENST00000399571 1760 ntBASIC25.3■■□□□ 1.64
TDP2O95551 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
TDP2O95551 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.3■■□□□ 1.64
TDP2O95551 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.29■■□□□ 1.64
TDP2O95551 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.29■■□□□ 1.64
TDP2O95551 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.29■■□□□ 1.64
TDP2O95551 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TDP2O95551 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TDP2O95551 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.29■■□□□ 1.64
TDP2O95551 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.29■■□□□ 1.64
TDP2O95551 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TDP2O95551 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TDP2O95551 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.28■■□□□ 1.64
TDP2O95551 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TDP2O95551 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TDP2O95551 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TDP2O95551 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TDP2O95551 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TDP2O95551 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TDP2O95551 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.27■■□□□ 1.64
TDP2O95551 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TDP2O95551 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.27■■□□□ 1.64
TDP2O95551 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TDP2O95551 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TDP2O95551 DUX4L19-201ENST00000557448 1267 ntBASIC25.27■■□□□ 1.64
TDP2O95551 AL136162.1-201ENST00000607711 1078 ntBASIC25.27■■□□□ 1.64
TDP2O95551 DUSP8P5-201ENST00000422884 1815 ntBASIC25.27■■□□□ 1.64
TDP2O95551 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TDP2O95551 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TDP2O95551 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.26■■□□□ 1.63
TDP2O95551 AC024257.2-201ENST00000549699 147 ntBASIC25.26■■□□□ 1.63
TDP2O95551 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TDP2O95551 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TDP2O95551 AL499627.2-201ENST00000606283 725 ntBASIC25.26■■□□□ 1.63
TDP2O95551 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TDP2O95551 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.26■■□□□ 1.63
TDP2O95551 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.25■■□□□ 1.63
TDP2O95551 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TDP2O95551 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TDP2O95551 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TDP2O95551 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TDP2O95551 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TDP2O95551 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TDP2O95551 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms