Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIX6O95475 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.66■□□□□ 0.58
SIX6O95475 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX6O95475 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX6O95475 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX6O95475 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX6O95475 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX6O95475 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.65■□□□□ 0.58
SIX6O95475 AC079630.1-202ENST00000618127 1840 ntBASIC18.65■□□□□ 0.58
SIX6O95475 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 AC005229.4-201ENST00000610085 2198 ntBASIC18.65■□□□□ 0.58
SIX6O95475 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SIX6O95475 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.65■□□□□ 0.58
SIX6O95475 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SIX6O95475 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SIX6O95475 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIX6O95475 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIX6O95475 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIX6O95475 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.64■□□□□ 0.58
SIX6O95475 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SIX6O95475 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.64■□□□□ 0.57
SIX6O95475 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SIX6O95475 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.64■□□□□ 0.57
SIX6O95475 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SIX6O95475 AC080038.3-201ENST00000623346 1952 ntBASIC18.64■□□□□ 0.57
SIX6O95475 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX6O95475 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.64■□□□□ 0.57
SIX6O95475 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SIX6O95475 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIX6O95475 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SIX6O95475 LINC01971-201ENST00000617888 1048 ntBASIC18.63■□□□□ 0.57
SIX6O95475 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIX6O95475 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.63■□□□□ 0.57
SIX6O95475 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
SIX6O95475 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.63■□□□□ 0.57
SIX6O95475 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.63■□□□□ 0.57
SIX6O95475 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.63■□□□□ 0.57
SIX6O95475 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX6O95475 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.62■□□□□ 0.57
SIX6O95475 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.62■□□□□ 0.57
SIX6O95475 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SIX6O95475 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SIX6O95475 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX6O95475 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX6O95475 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX6O95475 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SIX6O95475 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX6O95475 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
SIX6O95475 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX6O95475 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SIX6O95475 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SIX6O95475 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.6■□□□□ 0.57
SIX6O95475 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX6O95475 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms