Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC141586.4-201ENST00000624558 1573 ntBASIC23.99■■□□□ 1.43
CSPG5O95196 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSPG5O95196 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSPG5O95196 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSPG5O95196 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CSPG5O95196 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CSPG5O95196 AC133637.1-201ENST00000624115 1537 ntBASIC23.98■■□□□ 1.43
CSPG5O95196 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
CSPG5O95196 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSPG5O95196 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.98■■□□□ 1.43
CSPG5O95196 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSPG5O95196 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CSPG5O95196 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSPG5O95196 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSPG5O95196 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CSPG5O95196 DUSP8P4-201ENST00000399538 1761 ntBASIC23.97■■□□□ 1.43
CSPG5O95196 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.97■■□□□ 1.43
CSPG5O95196 HLA-L-209ENST00000420110 1011 ntBASIC23.97■■□□□ 1.43
CSPG5O95196 AC123595.1-201ENST00000440769 1046 ntBASIC23.97■■□□□ 1.43
CSPG5O95196 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.97■■□□□ 1.43
CSPG5O95196 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.97■■□□□ 1.43
CSPG5O95196 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.97■■□□□ 1.43
CSPG5O95196 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.97■■□□□ 1.43
CSPG5O95196 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.97■■□□□ 1.43
CSPG5O95196 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSPG5O95196 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
CSPG5O95196 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.96■■□□□ 1.43
CSPG5O95196 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.96■■□□□ 1.43
CSPG5O95196 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.96■■□□□ 1.43
CSPG5O95196 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.96■■□□□ 1.43
CSPG5O95196 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSPG5O95196 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CSPG5O95196 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.95■■□□□ 1.43
CSPG5O95196 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CSPG5O95196 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.95■■□□□ 1.42
CSPG5O95196 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.95■■□□□ 1.42
CSPG5O95196 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.95■■□□□ 1.42
CSPG5O95196 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSPG5O95196 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSPG5O95196 AL354811.1-201ENST00000610286 706 ntBASIC23.95■■□□□ 1.42
CSPG5O95196 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CSPG5O95196 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CSPG5O95196 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.95■■□□□ 1.42
CSPG5O95196 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSPG5O95196 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSPG5O95196 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSPG5O95196 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSPG5O95196 AC091060.1-201ENST00000623524 1766 ntBASIC23.94■■□□□ 1.42
CSPG5O95196 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.94■■□□□ 1.42
CSPG5O95196 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.94■■□□□ 1.42
CSPG5O95196 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.94■■□□□ 1.42
CSPG5O95196 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.94■■□□□ 1.42
CSPG5O95196 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.93■■□□□ 1.42
CSPG5O95196 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.93■■□□□ 1.42
CSPG5O95196 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.93■■□□□ 1.42
CSPG5O95196 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSPG5O95196 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSPG5O95196 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSPG5O95196 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.93■■□□□ 1.42
CSPG5O95196 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSPG5O95196 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CSPG5O95196 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CSPG5O95196 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.92■■□□□ 1.42
CSPG5O95196 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.92■■□□□ 1.42
CSPG5O95196 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.92■■□□□ 1.42
CSPG5O95196 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSPG5O95196 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CSPG5O95196 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.92■■□□□ 1.42
CSPG5O95196 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSPG5O95196 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.92■■□□□ 1.42
CSPG5O95196 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.91■■□□□ 1.42
CSPG5O95196 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.91■■□□□ 1.42
CSPG5O95196 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.91■■□□□ 1.42
CSPG5O95196 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CSPG5O95196 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CSPG5O95196 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSPG5O95196 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CSPG5O95196 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
CSPG5O95196 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.9■■□□□ 1.42
CSPG5O95196 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSPG5O95196 LINC02228-203ENST00000641970 1355 ntBASIC23.9■■□□□ 1.42
CSPG5O95196 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
CSPG5O95196 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.89■■□□□ 1.41
CSPG5O95196 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms