Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFPL1O75677 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.43■■□□□ 1.18
RFPL1O75677 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.43■■□□□ 1.18
RFPL1O75677 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.43■■□□□ 1.18
RFPL1O75677 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.42■■□□□ 1.18
RFPL1O75677 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RFPL1O75677 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.42■■□□□ 1.18
RFPL1O75677 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL1O75677 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.41■■□□□ 1.18
RFPL1O75677 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RFPL1O75677 AF131216.4-201ENST00000638924 1588 ntBASIC22.41■■□□□ 1.18
RFPL1O75677 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL1O75677 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.4■■□□□ 1.18
RFPL1O75677 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL1O75677 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL1O75677 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.4■■□□□ 1.18
RFPL1O75677 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.4■■□□□ 1.18
RFPL1O75677 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RFPL1O75677 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL1O75677 ESRRAP2-201ENST00000418437 1549 ntBASIC22.4■■□□□ 1.18
RFPL1O75677 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.4■■□□□ 1.18
RFPL1O75677 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL1O75677 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RFPL1O75677 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL1O75677 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RFPL1O75677 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RFPL1O75677 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.39■■□□□ 1.18
RFPL1O75677 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.39■■□□□ 1.18
RFPL1O75677 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
RFPL1O75677 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RFPL1O75677 AC120024.1-201ENST00000562672 995 ntBASIC22.39■■□□□ 1.17
RFPL1O75677 MIR4787-201ENST00000607364 84 ntBASIC22.39■■□□□ 1.17
RFPL1O75677 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RFPL1O75677 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RFPL1O75677 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFPL1O75677 AC242852.2-201ENST00000615738 1807 ntBASIC22.38■■□□□ 1.17
RFPL1O75677 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.38■■□□□ 1.17
RFPL1O75677 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RFPL1O75677 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RFPL1O75677 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.38■■□□□ 1.17
RFPL1O75677 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.38■■□□□ 1.17
RFPL1O75677 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
RFPL1O75677 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL1O75677 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.37■■□□□ 1.17
RFPL1O75677 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RFPL1O75677 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RFPL1O75677 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
RFPL1O75677 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL1O75677 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.37■■□□□ 1.17
RFPL1O75677 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.36■■□□□ 1.17
RFPL1O75677 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.36■■□□□ 1.17
RFPL1O75677 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.36■■□□□ 1.17
RFPL1O75677 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 AC137767.1-201ENST00000602918 1920 ntBASIC22.36■■□□□ 1.17
RFPL1O75677 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.36■■□□□ 1.17
RFPL1O75677 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.36■■□□□ 1.17
RFPL1O75677 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.36■■□□□ 1.17
RFPL1O75677 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
RFPL1O75677 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL1O75677 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
RFPL1O75677 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RFPL1O75677 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.35■■□□□ 1.17
RFPL1O75677 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RFPL1O75677 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFPL1O75677 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.35■■□□□ 1.17
RFPL1O75677 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms