Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.74■■□□□ 1.23
PRAMEF11O60813 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PRAMEF11O60813 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PRAMEF11O60813 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PRAMEF11O60813 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PRAMEF11O60813 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PRAMEF11O60813 DUX4L19-201ENST00000557448 1267 ntBASIC22.73■■□□□ 1.23
PRAMEF11O60813 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.73■■□□□ 1.23
PRAMEF11O60813 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.73■■□□□ 1.23
PRAMEF11O60813 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.73■■□□□ 1.23
PRAMEF11O60813 DUSP8P5-201ENST00000422884 1815 ntBASIC22.73■■□□□ 1.23
PRAMEF11O60813 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PRAMEF11O60813 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PRAMEF11O60813 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.72■■□□□ 1.23
PRAMEF11O60813 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.72■■□□□ 1.23
PRAMEF11O60813 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PRAMEF11O60813 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.72■■□□□ 1.23
PRAMEF11O60813 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.72■■□□□ 1.23
PRAMEF11O60813 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PRAMEF11O60813 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.72■■□□□ 1.23
PRAMEF11O60813 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PRAMEF11O60813 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PRAMEF11O60813 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.72■■□□□ 1.23
PRAMEF11O60813 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PRAMEF11O60813 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.71■■□□□ 1.23
PRAMEF11O60813 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.71■■□□□ 1.23
PRAMEF11O60813 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 MIR3181-201ENST00000578512 73 ntBASIC22.71■■□□□ 1.23
PRAMEF11O60813 AL499627.2-201ENST00000606283 725 ntBASIC22.71■■□□□ 1.23
PRAMEF11O60813 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.71■■□□□ 1.23
PRAMEF11O60813 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PRAMEF11O60813 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PRAMEF11O60813 SYT6-210ENST00000641643 1587 ntBASIC22.71■■□□□ 1.23
PRAMEF11O60813 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.71■■□□□ 1.23
PRAMEF11O60813 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.7■■□□□ 1.22
PRAMEF11O60813 SERBP1P1-201ENST00000396021 1160 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.7■■□□□ 1.22
PRAMEF11O60813 pRNA.6-201ENST00000610482 90 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 pRNA.5-201ENST00000612139 90 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 pRNA.11-201ENST00000618423 90 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 pRNA.13-201ENST00000619112 90 ntBASIC22.7■■□□□ 1.22
PRAMEF11O60813 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.7■■□□□ 1.22
PRAMEF11O60813 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PRAMEF11O60813 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PRAMEF11O60813 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PRAMEF11O60813 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.69■■□□□ 1.22
PRAMEF11O60813 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PRAMEF11O60813 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PRAMEF11O60813 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.69■■□□□ 1.22
PRAMEF11O60813 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PRAMEF11O60813 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 UNC93B3-201ENST00000308076 687 ntBASIC22.68■■□□□ 1.22
PRAMEF11O60813 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 AL138724.1-201ENST00000606771 1088 ntBASIC22.68■■□□□ 1.22
PRAMEF11O60813 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.68■■□□□ 1.22
PRAMEF11O60813 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRAMEF11O60813 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PRAMEF11O60813 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.67■■□□□ 1.22
PRAMEF11O60813 AC096631.2-201ENST00000436136 790 ntBASIC22.67■■□□□ 1.22
PRAMEF11O60813 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.67■■□□□ 1.22
PRAMEF11O60813 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PRAMEF11O60813 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.67■■□□□ 1.22
PRAMEF11O60813 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PRAMEF11O60813 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PRAMEF11O60813 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PRAMEF11O60813 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PRAMEF11O60813 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRAMEF11O60813 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.65■■□□□ 1.22
PRAMEF11O60813 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PRAMEF11O60813 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRAMEF11O60813 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PRAMEF11O60813 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.65■■□□□ 1.22
PRAMEF11O60813 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRAMEF11O60813 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PRAMEF11O60813 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
PRAMEF11O60813 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms