Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 LINC01529-204ENST00000636474 1715 ntBASIC23.02■■□□□ 1.28
TSPAN3O60637 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.02■■□□□ 1.28
TSPAN3O60637 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.02■■□□□ 1.28
TSPAN3O60637 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.02■■□□□ 1.28
TSPAN3O60637 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.02■■□□□ 1.28
TSPAN3O60637 DUX4L4-201ENST00000566884 1269 ntBASIC23.02■■□□□ 1.28
TSPAN3O60637 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TSPAN3O60637 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TSPAN3O60637 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TSPAN3O60637 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.01■■□□□ 1.27
TSPAN3O60637 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TSPAN3O60637 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TSPAN3O60637 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.01■■□□□ 1.27
TSPAN3O60637 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.01■■□□□ 1.27
TSPAN3O60637 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TSPAN3O60637 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.01■■□□□ 1.27
TSPAN3O60637 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.01■■□□□ 1.27
TSPAN3O60637 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TSPAN3O60637 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TSPAN3O60637 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23■■□□□ 1.27
TSPAN3O60637 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23■■□□□ 1.27
TSPAN3O60637 AC099791.1-201ENST00000416440 715 ntBASIC23■■□□□ 1.27
TSPAN3O60637 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23■■□□□ 1.27
TSPAN3O60637 AC105265.2-201ENST00000467189 838 ntBASIC23■■□□□ 1.27
TSPAN3O60637 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TSPAN3O60637 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23■■□□□ 1.27
TSPAN3O60637 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23■■□□□ 1.27
TSPAN3O60637 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TSPAN3O60637 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23■■□□□ 1.27
TSPAN3O60637 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TSPAN3O60637 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
TSPAN3O60637 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.99■■□□□ 1.27
TSPAN3O60637 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 AC133637.1-201ENST00000624115 1537 ntBASIC22.99■■□□□ 1.27
TSPAN3O60637 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
TSPAN3O60637 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.99■■□□□ 1.27
TSPAN3O60637 CA15P2-201ENST00000611168 834 ntBASIC22.99■■□□□ 1.27
TSPAN3O60637 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TSPAN3O60637 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
TSPAN3O60637 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.99■■□□□ 1.27
TSPAN3O60637 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.99■■□□□ 1.27
TSPAN3O60637 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.98■■□□□ 1.27
TSPAN3O60637 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TSPAN3O60637 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TSPAN3O60637 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TSPAN3O60637 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TSPAN3O60637 AC091305.1-201ENST00000479476 895 ntBASIC22.98■■□□□ 1.27
TSPAN3O60637 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TSPAN3O60637 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TSPAN3O60637 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.97■■□□□ 1.27
TSPAN3O60637 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 AC027682.1-201ENST00000562846 899 ntBASIC22.97■■□□□ 1.27
TSPAN3O60637 AL499627.2-201ENST00000606283 725 ntBASIC22.97■■□□□ 1.27
TSPAN3O60637 RASA4CP-201ENST00000424092 1398 ntBASIC22.97■■□□□ 1.27
TSPAN3O60637 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.97■■□□□ 1.27
TSPAN3O60637 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
TSPAN3O60637 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TSPAN3O60637 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TSPAN3O60637 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.96■■□□□ 1.27
TSPAN3O60637 AC233992.3-201ENST00000607491 485 ntBASIC22.96■■□□□ 1.27
TSPAN3O60637 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TSPAN3O60637 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TSPAN3O60637 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
TSPAN3O60637 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms