Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC005837.3-201ENST00000612163 286 ntBASIC25.13■■□□□ 1.61
CHMP2AO43633 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP2AO43633 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP2AO43633 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CHMP2AO43633 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.13■■□□□ 1.61
CHMP2AO43633 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CHMP2AO43633 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP2AO43633 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP2AO43633 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP2AO43633 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP2AO43633 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP2AO43633 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP2AO43633 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP2AO43633 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP2AO43633 ANOS2P-203ENST00000472227 1816 ntBASIC25.12■■□□□ 1.61
CHMP2AO43633 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP2AO43633 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.11■■□□□ 1.61
CHMP2AO43633 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.11■■□□□ 1.61
CHMP2AO43633 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP2AO43633 FP325331.1-202ENST00000623531 1380 ntBASIC25.11■■□□□ 1.61
CHMP2AO43633 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.11■■□□□ 1.61
CHMP2AO43633 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.11■■□□□ 1.61
CHMP2AO43633 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP2AO43633 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.11■■□□□ 1.61
CHMP2AO43633 AC019069.1-201ENST00000610008 1333 ntBASIC25.11■■□□□ 1.61
CHMP2AO43633 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 AL353803.4-201ENST00000565882 1934 ntBASIC25.1■■□□□ 1.61
CHMP2AO43633 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.1■■□□□ 1.61
CHMP2AO43633 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CHMP2AO43633 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.1■■□□□ 1.61
CHMP2AO43633 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.1■■□□□ 1.61
CHMP2AO43633 DUX4L4-201ENST00000566884 1269 ntBASIC25.1■■□□□ 1.61
CHMP2AO43633 AL138724.1-201ENST00000606771 1088 ntBASIC25.1■■□□□ 1.61
CHMP2AO43633 AC011298.3-201ENST00000615796 283 ntBASIC25.1■■□□□ 1.61
CHMP2AO43633 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.1■■□□□ 1.61
CHMP2AO43633 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP2AO43633 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CHMP2AO43633 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.09■■□□□ 1.61
CHMP2AO43633 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.09■■□□□ 1.61
CHMP2AO43633 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
CHMP2AO43633 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP2AO43633 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP2AO43633 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
CHMP2AO43633 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP2AO43633 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP2AO43633 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP2AO43633 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP2AO43633 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.08■■□□□ 1.61
CHMP2AO43633 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.08■■□□□ 1.61
CHMP2AO43633 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.08■■□□□ 1.61
CHMP2AO43633 AC133561.4-201ENST00000566112 224 ntBASIC25.08■■□□□ 1.61
CHMP2AO43633 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP2AO43633 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CHMP2AO43633 AL031432.3-201ENST00000607698 485 ntBASIC25.08■■□□□ 1.61
CHMP2AO43633 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.08■■□□□ 1.61
CHMP2AO43633 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CHMP2AO43633 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 AC136469.2-201ENST00000623944 1028 ntBASIC25.07■■□□□ 1.6
CHMP2AO43633 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.07■■□□□ 1.6
CHMP2AO43633 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP2AO43633 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP2AO43633 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP2AO43633 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP2AO43633 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP2AO43633 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.06■■□□□ 1.6
CHMP2AO43633 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP2AO43633 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.06■■□□□ 1.6
CHMP2AO43633 AC142381.2-201ENST00000566120 298 ntBASIC25.06■■□□□ 1.6
CHMP2AO43633 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.06■■□□□ 1.6
CHMP2AO43633 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHMP2AO43633 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.06■■□□□ 1.6
CHMP2AO43633 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP2AO43633 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP2AO43633 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP2AO43633 EDA-201ENST00000338901 1233 ntBASIC25.05■■□□□ 1.6
CHMP2AO43633 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP2AO43633 AL355001.2-201ENST00000620617 1191 ntBASIC25.05■■□□□ 1.6
CHMP2AO43633 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.05■■□□□ 1.6
CHMP2AO43633 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.05■■□□□ 1.6
CHMP2AO43633 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP2AO43633 AC133637.1-201ENST00000624115 1537 ntBASIC25.05■■□□□ 1.6
CHMP2AO43633 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CHMP2AO43633 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CHMP2AO43633 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP2AO43633 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP2AO43633 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.04■■□□□ 1.6
CHMP2AO43633 AF213884.3-201ENST00000563833 479 ntBASIC25.04■■□□□ 1.6
CHMP2AO43633 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CHMP2AO43633 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CHMP2AO43633 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP2AO43633 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP2AO43633 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms