Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
TNRC18O15417 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TNRC18O15417 AC142381.4-202ENST00000563973 229 ntBASIC24.91■■□□□ 1.58
TNRC18O15417 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
TNRC18O15417 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TNRC18O15417 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.9■■□□□ 1.58
TNRC18O15417 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.9■■□□□ 1.58
TNRC18O15417 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC18O15417 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.9■■□□□ 1.58
TNRC18O15417 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
TNRC18O15417 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNRC18O15417 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TNRC18O15417 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.89■■□□□ 1.57
TNRC18O15417 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.89■■□□□ 1.57
TNRC18O15417 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNRC18O15417 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNRC18O15417 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.88■■□□□ 1.57
TNRC18O15417 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.88■■□□□ 1.57
TNRC18O15417 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
TNRC18O15417 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.88■■□□□ 1.57
TNRC18O15417 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.88■■□□□ 1.57
TNRC18O15417 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNRC18O15417 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.87■■□□□ 1.57
TNRC18O15417 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNRC18O15417 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TNRC18O15417 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.87■■□□□ 1.57
TNRC18O15417 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNRC18O15417 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.87■■□□□ 1.57
TNRC18O15417 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TNRC18O15417 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.87■■□□□ 1.57
TNRC18O15417 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
TNRC18O15417 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
TNRC18O15417 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
TNRC18O15417 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.86■■□□□ 1.57
TNRC18O15417 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TNRC18O15417 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.85■■□□□ 1.57
TNRC18O15417 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TNRC18O15417 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
TNRC18O15417 AC083880.1-201ENST00000608266 535 ntBASIC24.85■■□□□ 1.57
TNRC18O15417 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.85■■□□□ 1.57
TNRC18O15417 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.85■■□□□ 1.57
TNRC18O15417 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.85■■□□□ 1.57
TNRC18O15417 DRD5P2-201ENST00000421395 2012 ntBASIC24.85■■□□□ 1.57
TNRC18O15417 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.85■■□□□ 1.57
TNRC18O15417 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
TNRC18O15417 AC105233.4-201ENST00000642045 216 ntBASIC24.85■■□□□ 1.57
TNRC18O15417 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNRC18O15417 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNRC18O15417 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC18O15417 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.84■■□□□ 1.57
TNRC18O15417 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC18O15417 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC18O15417 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.84■■□□□ 1.57
TNRC18O15417 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.84■■□□□ 1.57
TNRC18O15417 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC18O15417 AC007322.1-201ENST00000426983 750 ntBASIC24.84■■□□□ 1.57
TNRC18O15417 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC18O15417 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC18O15417 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC18O15417 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.84■■□□□ 1.57
TNRC18O15417 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC18O15417 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.84■■□□□ 1.57
TNRC18O15417 AC128676.1-201ENST00000454392 318 ntBASIC24.84■■□□□ 1.57
TNRC18O15417 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC18O15417 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TNRC18O15417 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
TNRC18O15417 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TNRC18O15417 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TNRC18O15417 AC142472.1-201ENST00000612013 1741 ntBASIC24.83■■□□□ 1.57
TNRC18O15417 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TNRC18O15417 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
TNRC18O15417 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
TNRC18O15417 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
TNRC18O15417 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.82■■□□□ 1.56
TNRC18O15417 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.82■■□□□ 1.56
TNRC18O15417 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.82■■□□□ 1.56
TNRC18O15417 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC18O15417 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.81■■□□□ 1.56
TNRC18O15417 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.81■■□□□ 1.56
TNRC18O15417 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNRC18O15417 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.81■■□□□ 1.56
TNRC18O15417 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.81■■□□□ 1.56
TNRC18O15417 MIR4497-201ENST00000583208 89 ntBASIC24.81■■□□□ 1.56
TNRC18O15417 UBE2DNL-204ENST00000602536 740 ntBASIC24.81■■□□□ 1.56
TNRC18O15417 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
TNRC18O15417 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNRC18O15417 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNRC18O15417 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNRC18O15417 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
TNRC18O15417 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms