Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 LINC00526-201ENST00000581067 1875 ntBASIC17.89■□□□□ 0.45
UPK2O00526 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
UPK2O00526 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 MIR6722-201ENST00000617286 78 ntBASIC17.89■□□□□ 0.45
UPK2O00526 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.89■□□□□ 0.45
UPK2O00526 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.89■□□□□ 0.45
UPK2O00526 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK2O00526 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK2O00526 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.89■□□□□ 0.45
UPK2O00526 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK2O00526 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK2O00526 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK2O00526 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.88■□□□□ 0.45
UPK2O00526 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 AC005703.6-201ENST00000623265 1329 ntBASIC17.88■□□□□ 0.45
UPK2O00526 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 AC021242.3-201ENST00000607598 1377 ntBASIC17.88■□□□□ 0.45
UPK2O00526 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
UPK2O00526 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.88■□□□□ 0.45
UPK2O00526 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK2O00526 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.87■□□□□ 0.45
UPK2O00526 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK2O00526 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK2O00526 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPK2O00526 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UPK2O00526 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK2O00526 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK2O00526 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK2O00526 BX664725.1-201ENST00000438252 379 ntBASIC17.86■□□□□ 0.45
UPK2O00526 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.86■□□□□ 0.45
UPK2O00526 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UPK2O00526 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK2O00526 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UPK2O00526 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK2O00526 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK2O00526 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK2O00526 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
UPK2O00526 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UPK2O00526 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK2O00526 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK2O00526 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK2O00526 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK2O00526 AC127496.7-201ENST00000625110 1798 ntBASIC17.85■□□□□ 0.45
UPK2O00526 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK2O00526 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK2O00526 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 AC242852.2-201ENST00000615738 1807 ntBASIC17.84■□□□□ 0.45
UPK2O00526 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UPK2O00526 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.84■□□□□ 0.45
UPK2O00526 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.84■□□□□ 0.45
UPK2O00526 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK2O00526 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UPK2O00526 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UPK2O00526 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UPK2O00526 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.83■□□□□ 0.45
UPK2O00526 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms