Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.29■■□□□ 1
RTCAO00442 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RTCAO00442 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
RTCAO00442 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.28■■□□□ 1
RTCAO00442 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTCAO00442 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RTCAO00442 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCAO00442 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.27■■□□□ 1
RTCAO00442 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.27■■□□□ 1
RTCAO00442 C17orf82-201ENST00000623772 1530 ntBASIC21.27■■□□□ 1
RTCAO00442 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCAO00442 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTCAO00442 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTCAO00442 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTCAO00442 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RTCAO00442 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.26■□□□□ 0.99
RTCAO00442 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.26■□□□□ 0.99
RTCAO00442 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCAO00442 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.25■□□□□ 0.99
RTCAO00442 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTCAO00442 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.25■□□□□ 0.99
RTCAO00442 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCAO00442 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.25■□□□□ 0.99
RTCAO00442 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.25■□□□□ 0.99
RTCAO00442 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RTCAO00442 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCAO00442 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCAO00442 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCAO00442 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCAO00442 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
RTCAO00442 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 LINC01529-204ENST00000636474 1715 ntBASIC21.24■□□□□ 0.99
RTCAO00442 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.24■□□□□ 0.99
RTCAO00442 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RTCAO00442 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCAO00442 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCAO00442 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCAO00442 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTCAO00442 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCAO00442 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCAO00442 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCAO00442 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCAO00442 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCAO00442 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCAO00442 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 AL512631.2-201ENST00000604634 923 ntBASIC21.22■□□□□ 0.99
RTCAO00442 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RTCAO00442 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCAO00442 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTCAO00442 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RTCAO00442 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCAO00442 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCAO00442 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.21■□□□□ 0.99
RTCAO00442 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCAO00442 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCAO00442 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTCAO00442 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTCAO00442 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCAO00442 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RTCAO00442 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTCAO00442 C1orf229-201ENST00000623686 2258 ntBASIC21.21■□□□□ 0.99
RTCAO00442 FP325331.1-202ENST00000623531 1380 ntBASIC21.21■□□□□ 0.99
RTCAO00442 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
RTCAO00442 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.2■□□□□ 0.99
RTCAO00442 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
RTCAO00442 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RTCAO00442 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCAO00442 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCAO00442 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCAO00442 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms