Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 AC007375.3-201ENST00000600936 2314 ntBASIC20.61■□□□□ 0.89
TNFRSF11BO00300 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TNFRSF11BO00300 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF11BO00300 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 AL353803.4-201ENST00000565882 1934 ntBASIC20.59■□□□□ 0.89
TNFRSF11BO00300 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 U85056.1-201ENST00000616429 682 ntBASIC20.59■□□□□ 0.89
TNFRSF11BO00300 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TNFRSF11BO00300 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFRSF11BO00300 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF11BO00300 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF11BO00300 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.58■□□□□ 0.89
TNFRSF11BO00300 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF11BO00300 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF11BO00300 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF11BO00300 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF11BO00300 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TNFRSF11BO00300 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 AC019171.1-201ENST00000601251 1056 ntBASIC20.57■□□□□ 0.88
TNFRSF11BO00300 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 AC092053.2-201ENST00000640557 1818 ntBASIC20.57■□□□□ 0.88
TNFRSF11BO00300 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF11BO00300 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 AC139530.1-201ENST00000575312 1977 ntBASIC20.56■□□□□ 0.88
TNFRSF11BO00300 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF11BO00300 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 C11orf96-202ENST00000528572 1834 ntBASIC20.55■□□□□ 0.88
TNFRSF11BO00300 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFRSF11BO00300 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 AC139795.1-202ENST00000500444 432 ntBASIC20.54■□□□□ 0.88
TNFRSF11BO00300 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms