Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.71■■□□□ 1.07
TAF4O00268 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
TAF4O00268 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.7■■□□□ 1.07
TAF4O00268 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 CCDC92B-201ENST00000575506 885 ntBASIC21.7■■□□□ 1.06
TAF4O00268 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.7■■□□□ 1.06
TAF4O00268 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TAF4O00268 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TAF4O00268 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TAF4O00268 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.69■■□□□ 1.06
TAF4O00268 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.69■■□□□ 1.06
TAF4O00268 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.69■■□□□ 1.06
TAF4O00268 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.69■■□□□ 1.06
TAF4O00268 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.69■■□□□ 1.06
TAF4O00268 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TAF4O00268 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TAF4O00268 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TAF4O00268 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
TAF4O00268 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.68■■□□□ 1.06
TAF4O00268 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.68■■□□□ 1.06
TAF4O00268 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
TAF4O00268 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.68■■□□□ 1.06
TAF4O00268 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.68■■□□□ 1.06
TAF4O00268 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.68■■□□□ 1.06
TAF4O00268 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TAF4O00268 CLDN5-201ENST00000403084 2357 ntBASIC21.68■■□□□ 1.06
TAF4O00268 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 AP004609.3-201ENST00000610705 1884 ntBASIC21.67■■□□□ 1.06
TAF4O00268 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.67■■□□□ 1.06
TAF4O00268 RAP2CP1-201ENST00000605103 478 ntBASIC21.67■■□□□ 1.06
TAF4O00268 AC080038.1-201ENST00000611274 1154 ntBASIC21.67■■□□□ 1.06
TAF4O00268 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TAF4O00268 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.67■■□□□ 1.06
TAF4O00268 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TAF4O00268 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TAF4O00268 TSPY26P-201ENST00000476365 1326 ntBASIC21.66■■□□□ 1.06
TAF4O00268 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.66■■□□□ 1.06
TAF4O00268 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.66■■□□□ 1.06
TAF4O00268 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.66■■□□□ 1.06
TAF4O00268 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.66■■□□□ 1.06
TAF4O00268 AL358852.1-201ENST00000623174 1268 ntBASIC21.66■■□□□ 1.06
TAF4O00268 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TAF4O00268 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.65■■□□□ 1.06
TAF4O00268 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TAF4O00268 AC126544.1-201ENST00000580842 1059 ntBASIC21.65■■□□□ 1.06
TAF4O00268 MIR6084-201ENST00000622012 110 ntBASIC21.65■■□□□ 1.06
TAF4O00268 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TAF4O00268 AC009102.2-201ENST00000606772 1639 ntBASIC21.65■■□□□ 1.06
TAF4O00268 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
TAF4O00268 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.64■■□□□ 1.06
TAF4O00268 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.64■■□□□ 1.06
TAF4O00268 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.64■■□□□ 1.05
TAF4O00268 AC006455.2-201ENST00000429931 906 ntBASIC21.64■■□□□ 1.05
TAF4O00268 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TAF4O00268 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TAF4O00268 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TAF4O00268 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.63■■□□□ 1.05
TAF4O00268 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TAF4O00268 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TAF4O00268 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TAF4O00268 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TAF4O00268 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TAF4O00268 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.63■■□□□ 1.05
TAF4O00268 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.63■■□□□ 1.05
TAF4O00268 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.63■■□□□ 1.05
TAF4O00268 AC104771.1-201ENST00000603335 964 ntBASIC21.63■■□□□ 1.05
TAF4O00268 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TAF4O00268 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TAF4O00268 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms