Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRABD2BA6NFA1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRABD2BA6NFA1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRABD2BA6NFA1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 CDCA4P2-201ENST00000441182 718 ntBASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 RAP2CP1-201ENST00000605103 478 ntBASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRABD2BA6NFA1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 AC006015.1-201ENST00000429970 570 ntBASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRABD2BA6NFA1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 AC016769.1-201ENST00000409132 1010 ntBASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 TMEM191A-211ENST00000637163 1067 ntBASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 AC073111.5-205ENST00000641717 521 ntBASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 AC010501.1-201ENST00000606270 1962 ntBASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.43■■□□□ 1.02
TRABD2BA6NFA1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 AC104771.1-201ENST00000603335 964 ntBASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 AC141586.4-201ENST00000624558 1573 ntBASIC21.42■■□□□ 1.02
TRABD2BA6NFA1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms