Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 AL161729.1-201ENST00000604104 1402 ntBASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-6A6NCS4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 MIR6084-201ENST00000622012 110 ntBASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NKX2-6A6NCS4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 AC141586.4-201ENST00000624558 1573 ntBASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 AL137784.2-201ENST00000607332 1000 ntBASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-6A6NCS4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L2-201ENST00000561772 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L6-201ENST00000626483 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L1-201ENST00000627662 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L8-201ENST00000629013 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L3-201ENST00000630187 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L7-201ENST00000630678 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 DUX4L5-201ENST00000630834 1275 ntBASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-6A6NCS4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-6A6NCS4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NKX2-6A6NCS4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NKX2-6A6NCS4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms