Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.1■■□□□ 1.13
TRBV5-4A0A0C4DH59 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.09■■□□□ 1.13
TRBV5-4A0A0C4DH59 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.08■■□□□ 1.13
TRBV5-4A0A0C4DH59 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRBV5-4A0A0C4DH59 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRBV5-4A0A0C4DH59 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TRBV5-4A0A0C4DH59 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC099791.2-201ENST00000605725 427 ntBASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 AL499627.2-201ENST00000606283 725 ntBASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBV5-4A0A0C4DH59 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC006455.2-201ENST00000429931 906 ntBASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC009086.3-201ENST00000623486 1008 ntBASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.06■■□□□ 1.12
TRBV5-4A0A0C4DH59 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRBV5-4A0A0C4DH59 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRBV5-4A0A0C4DH59 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 C9orf163-202ENST00000624034 2573 ntBASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV5-4A0A0C4DH59 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 AL136116.3-201ENST00000402907 1138 ntBASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 AC092171.4-201ENST00000609130 632 ntBASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV5-4A0A0C4DH59 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRBV5-4A0A0C4DH59 AC068473.5-201ENST00000616428 2072 ntBASIC22.02■■□□□ 1.11
TRBV5-4A0A0C4DH59 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms