Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV22A0A0B4J277 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV22A0A0B4J277 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 RPS2-210ENST00000530225 765 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV22A0A0B4J277 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV22A0A0B4J277 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
TRAV22A0A0B4J277 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV22A0A0B4J277 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 ESRRAP2-201ENST00000418437 1549 ntBASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 SETD8P1-201ENST00000623146 1180 ntBASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV22A0A0B4J277 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV22A0A0B4J277 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 FBXW4P1-201ENST00000426721 2239 ntBASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms