Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 THA1P-201ENST00000590384 1145 ntBASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-4A0A0B4J246 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-4A0A0B4J246 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 AC120024.1-201ENST00000562672 995 ntBASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-4A0A0B4J246 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 MIR4508-201ENST00000584178 70 ntBASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 AC010980.1-201ENST00000587192 1142 ntBASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-4A0A0B4J246 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms