Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV1-2A0A0B4J238 FBXW4P1-201ENST00000426721 2239 ntBASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 AC080038.3-201ENST00000623346 1952 ntBASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
TRAV1-2A0A0B4J238 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV1-2A0A0B4J238 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV1-2A0A0B4J238 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV1-2A0A0B4J238 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV1-2A0A0B4J238 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRAV1-2A0A0B4J238 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV1-2A0A0B4J238 AC087742.1-201ENST00000575880 1738 ntBASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 LONRF2P2-201ENST00000439212 571 ntBASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV1-2A0A0B4J238 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 SPCS2P3-201ENST00000500401 656 ntBASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRAV1-2A0A0B4J238 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 GPX1-201ENST00000419349 1106 ntBASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV1-2A0A0B4J238 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV1-2A0A0B4J238 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms