Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 AP006261.1-201ENST00000584783 668 ntBASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-2A0A0B4J235 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV13-2A0A0B4J235 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TRAV13-2A0A0B4J235 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-2A0A0B4J235 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
TRAV13-2A0A0B4J235 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 FBXW4P1-201ENST00000426721 2239 ntBASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-2A0A0B4J235 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV13-2A0A0B4J235 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 AC087741.3-201ENST00000624270 1347 ntBASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 MIR3960-201ENST00000583311 91 ntBASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-2A0A0B4J235 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 KRT18P10-201ENST00000388836 1287 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L13-201ENST00000554103 1267 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L15-201ENST00000611059 1267 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L23-201ENST00000615195 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L24-201ENST00000617576 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L22-201ENST00000618238 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L20-201ENST00000619712 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L21-201ENST00000622058 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L10-201ENST00000622460 1267 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 DUX4L25-201ENST00000624915 1269 ntBASIC14.67□□□□□ -0.06
TRAV13-2A0A0B4J235 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms