Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 KRT18P60-201ENST00000312876 1297 ntBASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 RAP2CP1-202ENST00000605179 643 ntBASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-2A0A087WT02 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 AC242852.2-201ENST00000615738 1807 ntBASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV9-2A0A087WT02 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-2A0A087WT02 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 ATP5G2P3-201ENST00000429083 425 ntBASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV9-2A0A087WT02 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 MIR6765-201ENST00000614092 87 ntBASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 AC129492.7-201ENST00000622992 756 ntBASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-2A0A087WT02 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 BHLHE23-202ENST00000612929 1109 ntBASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms