Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 EEF1DP6-201ENST00000449232 372 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RN7SL788P-201ENST00000460504 316 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RN7SL767P-201ENST00000493013 295 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 KRT8P18-201ENST00000413425 1445 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC026316.1-201ENST00000398900 414 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AL512306.1-201ENST00000432698 848 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AL627422.1-201ENST00000434104 580 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 GRPEL2P1-201ENST00000453145 339 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SCARNA12-201ENST00000459155 270 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC130709.1-201ENST00000484779 1212 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 KLF17P1-201ENST00000547105 1126 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC103691.2-201ENST00000618824 433 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 AC007718.1-201ENST00000621078 280 ntBASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms