Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 Z98885.3-201ENST00000624882 1757 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 FGFR3P1-201ENST00000449999 601 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 DNM1P30-201ENST00000563586 452 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC051619.9-201ENST00000623237 597 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AL161773.1-201ENST00000624845 863 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 NAP1L6-202ENST00000641404 1222 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AL139424.3-202ENST00000641619 917 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 ZNF493-208ENST00000599461 1769 ntBASIC13.04□□□□□ -0.32
TREX2Q9BQ50 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
TREX2Q9BQ50 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 LINC00567-201ENST00000569854 3409 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 RN7SL530P-201ENST00000485097 298 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 RN7SL455P-201ENST00000580629 282 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 MIR3188-201ENST00000583494 85 ntBASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TREX2Q9BQ50 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms