Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC018445.4-201ENST00000624066 2291 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC012441.2-201ENST00000444843 739 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 CICP12-201ENST00000455801 843 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC022494.1-201ENST00000466044 728 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC091804.1-201ENST00000486888 567 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 ZNF767P-206ENST00000513792 565 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 MIR4783-201ENST00000580343 82 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 BNIP3P13-201ENST00000599968 566 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 HSPA8P9-201ENST00000485881 1943 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 DDX12P-201ENST00000432996 2947 ntBASIC12.34□□□□□ -0.43
LRRC28Q86X40 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AC099548.2-209ENST00000480264 625 ntBASIC12.34□□□□□ -0.43
LRRC28Q86X40 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 RN7SL163P-201ENST00000583100 276 ntBASIC12.34□□□□□ -0.43
LRRC28Q86X40 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AC009884.2-201ENST00000603110 324 ntBASIC12.34□□□□□ -0.43
LRRC28Q86X40 AC022748.3-201ENST00000621828 275 ntBASIC12.34□□□□□ -0.43
LRRC28Q86X40 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LRRC28Q86X40 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LRRC28Q86X40 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms