Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP7AQ04656 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ATP7AQ04656 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP7AQ04656 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP7AQ04656 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC19.62■□□□□ 0.73
ATP7AQ04656 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC19.62■□□□□ 0.73
ATP7AQ04656 AC103810.4-201ENST00000578601 257 ntBASIC19.62■□□□□ 0.73
ATP7AQ04656 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP7AQ04656 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP7AQ04656 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP7AQ04656 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATP7AQ04656 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATP7AQ04656 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 RPS6-201ENST00000315377 863 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 RPS15P5-201ENST00000449885 432 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 RPL7AP53-201ENST00000468834 793 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 IGHV3OR16-11-201ENST00000565524 349 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 AL365181.3-201ENST00000605886 3222 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATP7AQ04656 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 DTX2P1-201ENST00000425797 1633 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 AC005154.3-201ENST00000419639 1393 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 ASS1P9-201ENST00000513426 1236 ntBASIC19.61■□□□□ 0.73
ATP7AQ04656 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP7AQ04656 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP7AQ04656 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP7AQ04656 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP7AQ04656 HRC-203ENST00000595625 2044 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP7AQ04656 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
ATP7AQ04656 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATP7AQ04656 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP7AQ04656 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP7AQ04656 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 TPI1P3-201ENST00000335020 740 ntBASIC19.6■□□□□ 0.73
ATP7AQ04656 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
ATP7AQ04656 RN7SKP195-201ENST00000516587 303 ntBASIC19.6■□□□□ 0.73
ATP7AQ04656 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATP7AQ04656 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP7AQ04656 RN7SL5P-201ENST00000581458 321 ntBASIC19.6■□□□□ 0.73
ATP7AQ04656 MIR378I-201ENST00000582688 76 ntBASIC19.6■□□□□ 0.73
ATP7AQ04656 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP7AQ04656 RN7SL827P-201ENST00000607480 288 ntBASIC19.6■□□□□ 0.73
ATP7AQ04656 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP7AQ04656 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP7AQ04656 BX005132.1-201ENST00000641403 1580 ntBASIC19.59■□□□□ 0.73
ATP7AQ04656 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP7AQ04656 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP7AQ04656 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
ATP7AQ04656 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP7AQ04656 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP7AQ04656 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP7AQ04656 AC004884.1-201ENST00000393647 319 ntBASIC19.59■□□□□ 0.73
ATP7AQ04656 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP7AQ04656 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP7AQ04656 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP7AQ04656 CMC2-202ENST00000486645 766 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP7AQ04656 AKR1B1P3-201ENST00000525311 588 ntBASIC19.59■□□□□ 0.73
ATP7AQ04656 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms