Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC14.4□□□□□ -0.1
RB1P06400 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 DUX4L31-201ENST00000446466 1136 ntBASIC14.4□□□□□ -0.1
RB1P06400 AC010997.1-201ENST00000447646 350 ntBASIC14.4□□□□□ -0.1
RB1P06400 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC14.4□□□□□ -0.1
RB1P06400 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 OR52V1P-201ENST00000515557 898 ntBASIC14.4□□□□□ -0.1
RB1P06400 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.4□□□□□ -0.1
RB1P06400 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.4□□□□□ -0.1
RB1P06400 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.4□□□□□ -0.1
RB1P06400 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC14.4□□□□□ -0.1
RB1P06400 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.4□□□□□ -0.1
RB1P06400 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RB1P06400 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
RB1P06400 SFPQP1-201ENST00000446621 1786 ntBASIC14.39□□□□□ -0.11
RB1P06400 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 NOS2P3-201ENST00000411468 867 ntBASIC14.39□□□□□ -0.11
RB1P06400 NOS2P2-201ENST00000426269 867 ntBASIC14.39□□□□□ -0.11
RB1P06400 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 AK2P2-201ENST00000439142 405 ntBASIC14.39□□□□□ -0.11
RB1P06400 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RB1P06400 RN7SL794P-201ENST00000469816 280 ntBASIC14.39□□□□□ -0.11
RB1P06400 KRT18P42-201ENST00000505048 1255 ntBASIC14.39□□□□□ -0.11
RB1P06400 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC14.39□□□□□ -0.11
RB1P06400 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 PIGCP1-201ENST00000527583 895 ntBASIC14.39□□□□□ -0.11
RB1P06400 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC14.39□□□□□ -0.11
RB1P06400 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.39□□□□□ -0.11
RB1P06400 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.39□□□□□ -0.11
RB1P06400 ABCD1P3-201ENST00000562927 605 ntBASIC14.39□□□□□ -0.11
RB1P06400 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.39□□□□□ -0.11
RB1P06400 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 AL356740.1-201ENST00000602192 1297 ntBASIC14.39□□□□□ -0.11
RB1P06400 AC087072.1-201ENST00000603727 421 ntBASIC14.39□□□□□ -0.11
RB1P06400 OR3A1-202ENST00000615105 966 ntBASIC14.39□□□□□ -0.11
RB1P06400 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.39□□□□□ -0.11
RB1P06400 AC117500.5-201ENST00000623233 527 ntBASIC14.39□□□□□ -0.11
RB1P06400 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 AC020763.3-201ENST00000625095 2904 ntBASIC14.39□□□□□ -0.11
RB1P06400 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RB1P06400 BX640514.1-201ENST00000583223 1918 ntBASIC14.39□□□□□ -0.11
RB1P06400 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.39□□□□□ -0.11
RB1P06400 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms