Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AC108751.1-201ENST00000490852 363 ntBASIC10.45□□□□□ -0.74
COLCA2A8K830 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AL135744.1-201ENST00000565098 629 ntBASIC10.45□□□□□ -0.74
COLCA2A8K830 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
COLCA2A8K830 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AC004466.1-201ENST00000599515 1080 ntBASIC10.45□□□□□ -0.74
COLCA2A8K830 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 SART3-202ENST00000431469 2834 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 PIFO-202ENST00000369738 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 MBP-211ENST00000397875 2168 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC068299.1-201ENST00000624716 1749 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 DRD5P1-201ENST00000456605 1438 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 CRYGEP-201ENST00000412192 528 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 EIF3FP3-201ENST00000434851 1086 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.44□□□□□ -0.74
COLCA2A8K830 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 CD99P1-205ENST00000527459 561 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC138696.2-201ENST00000607376 223 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 AC027682.7-201ENST00000623147 2121 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC067931.2-201ENST00000623655 2003 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 AC020910.5-201ENST00000623668 1865 ntBASIC10.44□□□□□ -0.74
COLCA2A8K830 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 CASP7-210ENST00000614447 2555 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC10.44□□□□□ -0.74
COLCA2A8K830 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.44□□□□□ -0.74
COLCA2A8K830 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
COLCA2A8K830 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms