Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC138035.3-201ENST00000622706 2791 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.4□□□□□ -0.43
CHD8Q9HCK8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHD8Q9HCK8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.43
CHD8Q9HCK8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 JAML-211ENST00000533261 1508 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 KRT18P15-201ENST00000458108 1291 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AP000763.1-201ENST00000539481 325 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 NT5CP2-201ENST00000553305 561 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC015959.1-201ENST00000623263 1377 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 RBM14-203ENST00000409372 876 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MTND6P11-201ENST00000431890 483 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC116049.1-201ENST00000505282 385 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 HPR-203ENST00000561690 634 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC068987.2-201ENST00000565518 896 ntBASIC12.39□□□□□ -0.43
CHD8Q9HCK8 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHD8Q9HCK8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 RN7SL292P-201ENST00000473305 266 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AC110753.1-201ENST00000505711 1022 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AD000091.1-201ENST00000592379 287 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AL139424.3-202ENST00000641619 917 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 HSPA7-201ENST00000445535 1927 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 HCG11-201ENST00000411553 5696 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AC020763.3-201ENST00000625095 2904 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 KLK8-201ENST00000291726 853 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 MAS1LP1-206ENST00000419416 1047 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AP000346.2-202ENST00000425948 383 ntBASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms