Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 MIR1307-201ENST00000408840 149 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 DDX12P-201ENST00000432996 2947 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 SCARNA12-201ENST00000459155 270 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AL161670.2-201ENST00000557650 1227 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AC020922.3-201ENST00000595064 547 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 NDUFV2P1-201ENST00000596415 907 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AC107375.1-201ENST00000564464 2231 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 CAP2P1-201ENST00000557743 1390 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AL807761.2-201ENST00000422849 729 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 KRT8P13-201ENST00000463294 1010 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SCARNA20.5-201ENST00000516991 142 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 ACTG1P17-201ENST00000558391 1119 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms