Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AC007389.4-201ENST00000454674 793 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL590640.2-201ENST00000457038 527 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AP005018.1-201ENST00000525475 301 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 CR383656.12-201ENST00000549567 513 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 GNRHR2-203ENST00000581100 1187 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL591163.1-201ENST00000641757 987 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 FAM90A11P-201ENST00000518378 2218 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 FAM58BP-201ENST00000439056 645 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 CHMP1AP1-201ENST00000445563 662 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 RN7SL837P-201ENST00000463010 287 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 PGAM1P5-201ENST00000548011 764 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 AHCYP4-201ENST00000419201 1315 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 AC092028.1-202ENST00000641483 3547 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 AC092028.1-201ENST00000641781 3540 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 DDX12P-201ENST00000432996 2947 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 AF013593.1-201ENST00000458074 1487 ntBASIC11.24□□□□□ -0.61
RAB40CQ96S21 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
RAB40CQ96S21 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB40CQ96S21 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms